DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrg and il12rb2

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001106977.1 Gene:il12rb2 / 100134971 ZFINID:ZDB-GENE-080107-3 Length:792 Species:Danio rerio


Alignment Length:670 Identity:126/670 - (18%)
Similarity:210/670 - (31%) Gaps:218/670 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 CNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRAS----- 469
            |...:|.|   |:|.|                    |.|.|:.|..|   ||..|.|..:     
Zfish     8 CTVRSSTG---KEVLL--------------------GSNFTVSCIFN---KPCTKQLFRNNEPIK 46

  Fly   470 ---------------NWLTGGRYNVQANGDLEIQDVTFSDA------GKYTCYAQNKFGEIQA-- 511
                           |..|...:..:.|.:.|...:..:..      ...||..:.:||.:..  
Zfish    47 YELSPRSREVFVYIRNLTTLSIFTCKCNDNPEPCGIDITPGYPPNFPQNLTCIRKTEFGNVSCTW 111

  Fly   512 ----DGSLVVKEHTRITQEPQN-YEVAAGQS----ATFRCNEAHDDTLEIEIDWWKDGQSIDFEA 567
                |..:|.....|:..:|.: ||.....|    |||.                          
Zfish   112 TTGRDTKIVTTCQLRVQGDPHHGYESVMNSSGFCWATFP-------------------------- 150

  Fly   568 QPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPKLTGITCQADKAEI 632
                :|:..:.||::..:....|..|.|.                  |:.||:..:.|.:....:
Zfish   151 ----IKSRMSQLTVSLNVSNSLGSNTSVQ------------------PSLPKIKHVDCSSRWCHL 193

  Fly   633 HWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP-NTDSSFVVQ-MSPWANYTFRV-IAFNK- 693
            |    .||.|..| ..:|:.      |....::||. |...|..:. :.|:..|.|:: ...|: 
Zfish   194 H----TDNHSMNL-VEVQYK------SPKGIWKKVQINGKKSLNISLLEPYTKYMFQIRRKINQT 247

  Fly   694 IGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKR--- 755
            :|.....:.:....|:.:.|.|               |:.:..:.|::.:.....:.:.||.   
Zfish   248 MGLWSYWSQAKEAETKEEAPDK---------------VLDFWYLRELKPSQSEKCFRIFWKELSV 297

  Fly   756 ----------DIPAAAWENNNIF--DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVG 808
                      ||......:..|.  ..|.|..:.....:     :.|.|:|..|:|         
Zfish   298 SDAKGKIHQYDITVKKGNSREIIVVPRRINESICCSDCS-----VSVSAVNSMGQS--------- 348

  Fly   809 YSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVSEES---------VRGHFKGYKIQTWTENEGEE 864
                      |.||...|.....||:::...:|..|         :.|:...|.:..:...:.||
Zfish   349 ----------PENFIKLQTPHLVSGFLSHKSLSNHSIALSWPRLAIAGNITEYVVHWYPVGDIEE 403

  Fly   865 --GLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDT----PEGVPSPVQGL 923
              .:|.:..|     |.:|..:|.......:.|...  |||.::..|..|    ||..|.|.|  
Zfish   404 IQWIRVVDTK-----ANITGLRPQECFQGAVTALTS--NGPVASNKDLSTWQSAPEQGPVPQQ-- 459

  Fly   924 DAYPLGSSAFMLHWKKPLYPNGKLTG----YKIYYEEVKESYVGERREYDPHITDPRVTRMKMAG 984
              ....:.:.::.|.|  .|..|..|    |.:|   :.:...||...|.   .|..:|...::|
Zfish   460 --VKKKTESLIVKWSK--IPQEKRGGCLKKYTVY---LMDKSKGEIHHYS---VDYPLTEYIISG 514

  Fly   985 LKPNSKYRISITATTKMGEG 1004
            |.|...|.:.:||.|..|||
Zfish   515 LSPGQCYNLWVTAWTDAGEG 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845
IG_like 57..127 CDD:214653
Ig 135..214 CDD:299845
IG_like 141..216 CDD:214653
ig 251..332 CDD:278476
I-set 339..427 CDD:254352 6/16 (38%)
Ig 354..427 CDD:299845 6/16 (38%)
I-set 432..517 CDD:254352 18/116 (16%)
Ig 446..517 CDD:299845 18/102 (18%)
I-set 522..611 CDD:254352 14/93 (15%)
ig 525..609 CDD:278476 13/88 (15%)
FN3 613..707 CDD:238020 20/97 (21%)
FN3 716..807 CDD:238020 14/105 (13%)
fn3 817..905 CDD:278470 21/98 (21%)
FN3 917..1004 CDD:238020 23/90 (26%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
il12rb2NP_001106977.1 FN3 93..173 CDD:304408 18/109 (17%)
fn3 368..436 CDD:278470 12/74 (16%)
FN3 466..544 CDD:238020 22/77 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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