DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn75F and srp-6

DIOPT Version :9

Sequence 1:NP_001036614.1 Gene:Spn75F / 317912 FlyBaseID:FBgn0052203 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_504890.1 Gene:srp-6 / 179125 WormBaseID:WBGene00005647 Length:375 Species:Caenorhabditis elegans


Alignment Length:340 Identity:79/340 - (23%)
Similarity:155/340 - (45%) Gaps:59/340 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLKHSYAYNFEINLTKQLSKGRLARNFVYSPIAIRQALGLLYLSKDNVTDQQLESALQLTGLNQE 77
            ||.||.. :|.::|.:|.:   |..:||:||::|..||.|::::....|..::..|| |.|...|
 Worm    12 LLLHSET-DFGLSLLRQQN---LTESFVFSPLSIALALSLVHVAAKGETRDEIRKAL-LNGATDE 71

  Fly    78 EIISLFK--EAREKVAQE--QFTMGNRIYLSPDYNASPNITQLSENLGVEVKNMTFSG------- 131
            |:...|.  .|...||::  :..:.|.|:....:    .|.:|..|   :||.:..:|       
 Worm    72 ELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTF----TIKKLYLN---DVKKLYNAGASQLNFE 129

  Fly   132 DQSAASE-------------IKKWLNKWIGKAGGNLFGKNDISQTTQIVAVQGMSYSCVW--KNR 181
            ||.|::|             |||.:|            .:.||:....|......:...|  |.:
 Worm   130 DQEASAEAINNFVSENTKGHIKKIIN------------PDSISEELVAVLTNAFYFKANWQTKFK 182

  Fly   182 ETALTNRTFTLLRQNKKPFVYTTQMMYT-EAPMDFFNNDQVRGVMVPFKNSDMGMLVLLPRPRYS 245
            :.:...|.|.....:|:    .|:.::: .:...:..|.|.:.:.:|:|::...:.:.||:.|:.
 Worm   183 KESTYKREFFSSENSKR----ETEFLHSRNSNRKYSENGQFQVLSLPYKDTSFALSIFLPKTRFG 243

  Fly   246 TQQILYSLDTILKIKLRRSKK---THLFLPKFKVSESVDLNMALKALGIQNLFTNT-NAANFKQY 306
            ..:.|.:||::...:|..:..   .::.:||:|:..::.||.||.|:||:..||:: :.:||...
 Worm   244 LSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG 308

  Fly   307 NSFDADQNRVLMTID 321
            .......::.|:.:|
 Worm   309 IYISQAAHKALIEVD 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn75FNP_001036614.1 SERPIN 21..353 CDD:294093 75/332 (23%)
srp-6NP_504890.1 serpinL_nematode 16..374 CDD:381047 76/336 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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