DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn75F and srp-2

DIOPT Version :9

Sequence 1:NP_001036614.1 Gene:Spn75F / 317912 FlyBaseID:FBgn0052203 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:279 Identity:55/279 - (19%)
Similarity:116/279 - (41%) Gaps:45/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VYSPIAIRQALGLLYLSKDNVTDQQLESALQLTGLNQ--EEIISLFKEAREKVAQEQFTMGNRIY 102
            |.||::|...|.|::......|.::||..|   |.::  ||...|.:...:.....:..:.||::
 Worm    26 VLSPLSISLGLALIHAGACGSTQKELEDVL---GGSRIFEEFSGLMEAVGDTDNGVETKIVNRVF 87

  Fly   103 LSPDYNASPNITQLSENL-GVEVKNMTFSGDQSAASEIKKWL-NKWIGK--------AGGNLFGK 157
            ::..|....:..:..|.| ....:::.||..:.||..:..:: |...||        :..|.|. 
 Worm    88 VNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA- 151

  Fly   158 NDISQTTQIVAVQGMSYSCVWKNR--ETALTNRTFTLLRQNKKPFVYTTQMMYTEAPMDFFNNDQ 220
                     ..|..|.:...|:::  :.:.|.|.|.......:...:.|::   :...|:..:..
 Worm   152 ---------FLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTEL---DEHRDYTEDVL 204

  Fly   221 VRGVMVPFKNSDMGMLVLLPRPRYSTQQILYSLDTILKIK-------LRRSKKTHLF--LPKFKV 276
            .:.:.:.:.:....:.:.||:.|:..      :|.:.||.       |...|.:::.  :||||:
 Worm   205 FQVLSLKYADPKFTLAIFLPKQRFGL------VDALEKINGEYIQNLLNDLKSSYVSVQIPKFKI 263

  Fly   277 SESVDLNMALKALGIQNLF 295
            .:.:||...|:|:||:.:|
 Worm   264 EKELDLKETLEAIGIKEIF 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn75FNP_001036614.1 SERPIN 21..353 CDD:294093 55/279 (20%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 55/279 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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