DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn75F and serpine1

DIOPT Version :9

Sequence 1:NP_001036614.1 Gene:Spn75F / 317912 FlyBaseID:FBgn0052203 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001108031.1 Gene:serpine1 / 100136840 ZFINID:ZDB-GENE-070912-60 Length:384 Species:Danio rerio


Alignment Length:405 Identity:80/405 - (19%)
Similarity:151/405 - (37%) Gaps:95/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LICFLIFLLKHSYAYN--------FEINLTKQLSKGRLARNFVYSPIAIRQALGLLYLSKDNVTD 62
            |...|||.|..|...|        |.:.:..:..:....||...||..|...||:..:.....|.
Zfish     4 LSVLLIFALCASSLCNLIQDKQTDFGLQVFAEAVQSAPDRNLALSPYGIASVLGMAQMGAYGATL 68

  Fly    63 QQLES----ALQLTGL--------------NQEEIISLFKEAREKVAQEQFTMGNRIYLSPDYNA 109
            :.|.|    :||..|:              :..|:.|.....|:.:.::.|    |..||..:.:
Zfish    69 KLLASKMGYSLQERGMPKLQRLLQRDLASEDGVEVASGVMVDRKIILEKVF----RRSLSKAFQS 129

  Fly   110 SPNITQLSENLGVEVKNMTFSGDQSAASEIKKWLNKWIGKAGGNLFGKNDISQTTQIVAVQGMSY 174
            .|:             .:.||..:.|...|..|.:...............:|:.|::|.:..:.:
Zfish   130 VPH-------------QIDFSQPEMARQVINSWTSDHTDGMISEFLPSGVLSELTRLVFLNALHF 181

  Fly   175 SCVWKN----RETALTNRTFTLLRQN--KKPFVYTTQMM-YTEAPMDFFNNDQV--RGVMVPFKN 230
            ..|||.    |.|  ..:.|..:..:  ..|.:.|||.. |.|    |.:.|.|  ..:.:|::.
Zfish   182 HGVWKTPFDPRNT--REQLFHTVNGSAVSVPMMTTTQKFNYGE----FVSKDGVDYDVIEMPYEG 240

  Fly   231 SDMGMLVLLPRPRYSTQQILYSLDTIL--------KIKLRRSKKTHLFLPKFKVSESVDLNMALK 287
            ..:.||::.|   :.....|.:|:..|        :.::|:..| .|.:|:|.:...:||...|.
Zfish   241 ESISMLLVTP---FEKDVPLSALNKELSSSRIHQWRQEMRKISK-QLSIPRFSMDTEIDLKSTLS 301

  Fly   288 ALGIQNLFTNTNAANFKQYNSFDADQ----NRVLMTIDV--------GDDFDDRVVY-------- 332
            .:|:.::|:.:.|    .::....::    ::||..:.:        |......|:|        
Zfish   302 RMGLGDIFSQSRA----DFSRITTEEPLCVSKVLQRVKLEVNEEGTKGSSATAAVIYSRMAVEEI 362

  Fly   333 -VNRGFVFVVKDKST 346
             ::|.|.|:::.|.|
Zfish   363 TLDRPFFFLIQHKPT 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn75FNP_001036614.1 SERPIN 21..353 CDD:294093 74/390 (19%)
serpine1NP_001108031.1 SERPIN 26..384 CDD:294093 73/383 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.