DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32201 and p4htma

DIOPT Version :9

Sequence 1:NP_730346.2 Gene:CG32201 / 317911 FlyBaseID:FBgn0052201 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001074160.1 Gene:p4htma / 791209 ZFINID:ZDB-GENE-070112-2222 Length:478 Species:Danio rerio


Alignment Length:426 Identity:91/426 - (21%)
Similarity:155/426 - (36%) Gaps:126/426 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VQYNVQLTYRDL---IAMGNSMYQQSDYQTAAKWYRIACKRELENPEQLF--------------- 214
            |.||.....:|:   .:.|:.....:::||.:....:       :||..|               
Zfish    65 VHYNTGSGEQDVPLEKSAGSPRAVPAEHQTPSSTAHL-------SPEMSFQLPRLEGIRVGHVQR 122

  Fly   215 IQILGDPSEHLHRQYIKS-LFKYGSTTSEPSKSIEEAFIMVQASQEELDNIMSDLNEPQNDVEVE 278
            :.|:.|.:.::....:|. ||:.....     |:||:.:::|.:|.:.....|.|..|..:.::.
Zfish   123 VSIVPDRTHNMRTLSLKPLLFEIPGFL-----SVEESNVVMQLAQLKGLTHSSLLTNPDQEEQLT 182

  Fly   279 KD-LYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTANTFLRLAPLK-----LEE-----ISLDPF 332
            :| |:      |..:|...||. |:..::....||..::|....|:     ||.     :||..|
Zfish   183 QDELF------SLLDLNQDGLL-QREEILSLSHSTDGSWLSSYNLRKIHTGLETNPSGVLSLQEF 240

  Fly   333 MAMYHEVL-YDSEIRELKGQSMNMVNGYASQRN---------GT-----EIRDTVVRYDWWSNTS 382
            ..:...|| |....:.|.|.:.      ..||:         ||     .:|:.|.|.       
Zfish   241 KRVSGGVLRYSGAAQGLDGHTK------VRQRSTHTRLYLGEGTHHLLKSVRNRVTRL------- 292

  Fly   383 LVRERINQRIIDMTGFNFLKDEKLQIANYGLGTYFQPHFDYSSD-----------GFETPNITTL 436
               .|:...::|::       |.:::..|..|.:...|.|.|..           ...|.|  .:
Zfish   293 ---TRLPSSLVDLS-------EAMEVVRYEQGVFSHAHHDSSPTHPDNSCTHTHLAANTSN--QV 345

  Fly   437 GDRLASILFYASEVPQGGATVFP---------EI------------NVTVFPQKGSMLYWFNLHD 480
            ..|..::|.|.:....||.|.||         |:            |:.|.|..|:.|.|:|...
Zfish   346 ACRYLTVLLYLNSADSGGETSFPVADNRTYEEEVLGDLSQQYCDKGNLKVKPVAGTALLWYNHLS 410

  Fly   481 D-----GKPDIRSLHSVCPVLNGDRWTLTKWVPMFP 511
            |     |:.|..|||..|.|..|.:||.:.||.:.|
Zfish   411 DGNGWVGELDEFSLHGDCLVTRGFKWTGSVWVNIDP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32201NP_730346.2 P4Ha_N 36..165 CDD:285528
P4Hc 341..507 CDD:214780 47/216 (22%)
p4htmaNP_001074160.1 2OG-FeII_Oxy <272..442 CDD:304390 42/188 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583474
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.