DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32201 and p4ha3

DIOPT Version :9

Sequence 1:NP_730346.2 Gene:CG32201 / 317911 FlyBaseID:FBgn0052201 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:526 Identity:142/526 - (26%)
Similarity:248/526 - (47%) Gaps:87/526 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SSTVGLLKLLKVEEKFTDNLLNQVDQLGEKFEALRMYLSSVGYELHRSL-NEKVQYVSNPINAFS 98
            :|.:.:.:.:..|.|..|:|:..::...::.|.::.:.|.| ..||..: ||....::|||.||.
Zfish    26 TSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRFFSRV-TSLHDGIYNEPSDPIANPIAAFK 89

  Fly    99 LLRRTHEDLPKWHEYFKEAIGEGNQSILVD----LVKMVPNDVDMLSAMHGIQRIEKIYDLKIDD 159
            |::|...:   |.........|.|..:|.:    :...:|...|:..|.||:.|::.:|:|.::.
Zfish    90 LVKRLKSE---WLNVVHSTEAEENIKVLREDYRRMESSLPKLEDLRGAAHGLMRLQDVYNLHVES 151

  Fly   160 LAQGVLQGVQYNV---QLTYRDLIA------MGNSMYQQSDYQTAAKWYRIACK--RELE-NPEQ 212
            |.:|..|.:...|   :|:..|:::      :|...|...||..:..|:..|.:  |..| :||.
Zfish   152 LVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAYDLEDYYHSVLWFEEAVRLFRGTEWSPEN 216

  Fly   213 LFIQILGDPSEHLHRQYIKSLFKYGSTTSEPSKSIEEAFIMVQASQEELDNIMSDLNEPQN---- 273
              ...|.|..:||    ..|.||.|        :|..|   :..|:|.|      |::|.|    
Zfish   217 --EGTLEDALDHL----AFSHFKTG--------NISHA---LSLSRELL------LHDPMNRRVH 258

  Fly   274 -DVE-VEKDLYQ----------VKRSPSNCELGCRGLYRQ-------------KTNLVCRYKSTA 313
             :|| .||.|.:          :|| |....|..|..|.|             ..:|.|.|.:..
Zfish   259 FNVEKYEKLLNENLPATSSGLTLKR-PDGIYLRTRNAYEQLCQTKGSQPKHFENPSLFCDYFTNG 322

  Fly   314 NTFLRLAPLKLEEISLDPFMAMYHEVLYDSEIRELKGQSM-----NMVNGYASQRNGTEIRDTVV 373
            :..|.|.|::.|.|||.|::.::|..:..:|.:.::..:|     ::|   ||..|.......:.
Zfish   323 SPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAMPGLRRSVV---ASGMNQATAEYRIS 384

  Fly   374 RYDWWSNTS-LVRERINQRIIDMTGFNFLKD--EKLQIANYGLGTYFQPHFDY-SSDGFETPNIT 434
            :..|...:: .|..:::|||..:||.|....  |.||:.|||:|.:::||||: :||......:.
Zfish   385 KSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPHFDHATSDSSPLYRLK 449

  Fly   435 TLGDRLASILFYASEVPQGGATVFPEINVTVFPQKGSMLYWFNLHDDGKPDIRSLHSVCPVLNGD 499
            | |:|:|:|:.|.|.|..||:|.|...|.:|...:.:.|:|:|||.:|:.::.:||:.|||:.|:
Zfish   450 T-GNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQGNVDTLHAGCPVIVGN 513

  Fly   500 RWTLTK 505
            :|.:.|
Zfish   514 KWGMFK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32201NP_730346.2 P4Ha_N 36..165 CDD:285528 33/133 (25%)
P4Hc 341..507 CDD:214780 55/174 (32%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 33/133 (25%)
P4Hc 350..519 CDD:214780 54/172 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583392
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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