DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32201 and PH4alphaNE2

DIOPT Version :9

Sequence 1:NP_730346.2 Gene:CG32201 / 317911 FlyBaseID:FBgn0052201 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:537 Identity:152/537 - (28%)
Similarity:268/537 - (49%) Gaps:47/537 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLLGFAVLNSFVGCVEDIEEKERYSSSTVGLLKLLKVEEKFTDNLLNQVDQLGEKFEALRMYLSS 74
            ||||...|:...|.:.:...::|::.|.|.:..:|.:|    |:|::.|::|.   |||.....:
  Fly     7 VLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLE----DDLVSNVEKLA---EALARKAKT 64

  Fly    75 VGYELHRSLNEKVQYVS------NPINAFSLLRRTHEDLPKWHEYFKEAIGEGNQSILVDLVKMV 133
            :.:.:.:.:..:.:|.|      |||:.|||:|....:...|..|.:..:|:.....:...:.::
  Fly    65 IKWGVFKMMKRRQEYKSSMEIFANPIDTFSLIRHMQSNWLMWLLYLETPVGQEELFFVDSRMPLL 129

  Fly   134 PNDVDMLSAMHGIQRIEKIYDLKIDDLAQGVLQGVQYNVQLTYRDLIAMGNSMYQQSDYQTAAKW 198
            |...|.:.|..||::::..|.:...|:|:|:|.|||||..|...|.:|:|..:...|.:..|.:|
  Fly   130 PKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQW 194

  Fly   199 YRIACKRELENPEQLFIQILGDP--------------SEHLHRQYIKSLFKYGSTTSEPSKSIEE 249
            ...:.:...:...|..:::|..|              .:..|...::: ::.....|.....|.|
  Fly   195 ISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQA-YQVALKLSPHDPEIYE 258

  Fly   250 AFIMVQASQEELDNIMSDLNEPQNDVEVEKD-LYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTA 313
            .:.::    |:.|..:||: ||   :|.:|| .::....|..|...|: :.|..:||.|.|....
  Fly   259 EYRIL----EKRDLTLSDI-EP---IEQDKDNSHERLVLPPCCSGRCQ-VPRNLSNLYCVYNHVT 314

  Fly   314 NTFLRLAPLKLEEISLDPFMAMYHEVLYDSEIRELKGQSM-NMVNGYASQRNGTEIRDTVVRYD- 376
            :.||:|||:|.|.:|:|||:.:.|:::...|...::..|. :|:....:..:.::....|..|. 
  Fly   315 SPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRT 379

  Fly   377 ----WWSNT-SLVRERINQRIIDMTGFNFLKDEKLQIANYGLGTYFQPHFDYSSDGFETPNITTL 436
                |:|:. :...::|.:|:.|.||.:....|..|:.|||||.:|:.|.|....  |.......
  Fly   380 SKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLS--EKNRFNGT 442

  Fly   437 GDRLASILFYASEVPQGGATVFPEINVTVFPQKGSMLYWFNLHDDGKPDIRSLHSVCPVLNGDRW 501
            .||:|:.|||.:||.|||.|.||.:|:|||||.||.|:|:||...|...:.|||:.|||:.|.:|
  Fly   443 SDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKW 507

  Fly   502 TLTKWVPMFPQMFSFPC 518
            .::||:....|.|:.||
  Fly   508 VMSKWINDMGQEFTRPC 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32201NP_730346.2 P4Ha_N 36..165 CDD:285528 32/134 (24%)
P4Hc 341..507 CDD:214780 59/172 (34%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 32/134 (24%)
TPR repeat 175..200 CDD:276809 5/24 (21%)
TPR_16 176..254 CDD:290168 10/78 (13%)
TPR repeat 219..249 CDD:276809 1/30 (3%)
TPR_2 220..253 CDD:285020 2/33 (6%)
P4Hc 342..513 CDD:214780 59/172 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461775
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.910

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