DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32201 and P4ha3

DIOPT Version :9

Sequence 1:NP_730346.2 Gene:CG32201 / 317911 FlyBaseID:FBgn0052201 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:479 Identity:117/479 - (24%)
Similarity:194/479 - (40%) Gaps:102/479 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 YELHRSLNEKVQY-VSNPINAFSLLRRTHEDLPKWHEYFKEAIGEGNQSILVDLVKMVPNDV--- 137
            |:...||:|.::. |.||:.||:|::|...|   |...........|...|.|..:.|..|:   
  Rat    69 YDKVLSLHEDLKIPVVNPLLAFTLIKRLQSD---WRNVVHSLEATENIRALKDGYEKVEQDLPAF 130

  Fly   138 -DMLSAMHGIQRIEKIYDLKIDDLAQGVLQGVQ-------YN----VQLTYRDLIAMGNSMYQQS 190
             |:..|...:.|::.:|.|.:..|||||.|.|.       |:    ..||..|...:|...|...
  Rat   131 EDLEGAARALMRLQDVYMLNVKGLAQGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKVAYDTG 195

  Fly   191 DYQTAAKWYRIACKRELENPEQLFIQILGDPSEHLHRQYIKSLFKYGSTTSEPSKSIEEAFIMVQ 255
            ||..|..|        ||....||.:                  .||...:|...|:|:|...:.
  Rat   196 DYYHAIPW--------LEEAVSLFRR------------------SYGEWKTEDEASLEDALDYLA 234

  Fly   256 ASQEELDNIMSDLN--------EPQN-----------------------DVEVE---------KD 280
            .:..::.|:...|:        .|.|                       :..::         :|
  Rat   235 FACYQVGNVSCALSLSREFLVYSPDNKRMARNVLKYERLLAENGHLMAAETAIQRPNVPHLQTRD 299

  Fly   281 LYQVKRSPSNCE-LGCRGLYRQKTNLVCRYKSTANTFLRLAPLKLEEISLDPFMAMYHEVLYDSE 344
            .|:     ..|: ||.:..:.|..:|.|.|::.::.:|.|.|.:.|.|.|.|.:|:||:.:.|.|
  Rat   300 TYE-----GLCQTLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVIHLRPLVALYHDFVSDEE 359

  Fly   345 ---IRELKGQSMNMVNGYASQRNGTEIRDTVVRYDWWSNT-SLVRERINQRIIDMTGFNFLKD-- 403
               |||| .:.....:..||.....::...:.:..|..:| ..|...:::||..:||.:....  
  Rat   360 AQKIREL-AEPWLQRSVVASGEKQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYA 423

  Fly   404 EKLQIANYGLGTYFQPHFDYSSDGFETPNITTLGDRLASILFYASEVPQGGATVFPEINVTV--- 465
            |.||:.|||:|.:::||||:::...........|:|:|:::.|.|.|..||||.|...|.:|   
  Rat   424 EYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRVATLMIYLSSVEAGGATAFIYGNFSVPVV 488

  Fly   466 -FPQKGSMLYWFNLHDDGKPDIRS 488
             :|..|......|..|...|.:::
  Rat   489 KWPTSGYTSMDRNSEDPAAPILKT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32201NP_730346.2 P4Ha_N 36..165 CDD:285528 27/92 (29%)
P4Hc 341..507 CDD:214780 44/158 (28%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 13/41 (32%)
P4Hc 356..>478 CDD:214780 36/122 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343153
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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