DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32201 and p4ha1

DIOPT Version :9

Sequence 1:NP_730346.2 Gene:CG32201 / 317911 FlyBaseID:FBgn0052201 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:557 Identity:149/557 - (26%)
Similarity:250/557 - (44%) Gaps:79/557 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KYHSLLPVLLGFAVLNSFVGCVEDIEEKERYSSSTVGLLKLLKVEEKFTDNLLNQVDQLGEKFEA 67
            |.|.:||:|..|:..::            .:.:|...::.||..|:....:|.:.:....:|...
 Frog     2 KIHLVLPLLGLFSCAHA------------DFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQ 54

  Fly    68 LRMYLSSVGYELHRSLNEKVQYVSNPINAFSLLRRTHEDLPKWHEYFKEAIGEGNQSILVDLVKM 132
            ::.:...:.:....:..:...|:.:|:|||.|::|.:.:..|......:.|.:|..|.|....:.
 Frog    55 IKKWADKLDHLTDTATKDPEGYLGHPVNAFKLMKRLNTEWVKLENLILKDISDGFISNLTIQRQY 119

  Fly   133 VPNDVDMLSAMHGIQRIEKIYDLKIDDLAQGVLQGVQYNVQLTYRDLIAMGNSMYQQSDYQTAAK 197
            .|||.|...|...:.|::..|:|..|.:::|.|.||::...||..|...:|.:.|..:||.....
 Frog   120 FPNDEDQTGAAKALLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTEL 184

  Fly   198 WYRIACKRELENPEQLFIQILGDPSEHLHRQYIKSLFKYGSTTSEPSKSIEEAFIMVQASQE--- 259
            |.           ||...|:.......|.:..:   ..|.|........:::|..:.:.|.|   
 Frog   185 WM-----------EQALSQLDAGEESSLDKVMV---LDYLSYAVYQQGDLDKALTLTKRSLELDP 235

  Fly   260 -------ELDNIMS-----DLNEPQNDVE-----------VEKDLYQVKRSPSNCELGCRG---- 297
                   .|.:|||     ..:.|....|           :||:.|         |..|||    
 Frog   236 EHQRGNGNLRHIMSKESNKSSSSPSEGAELRTRKGRPKDHLEKEKY---------EKLCRGEGVK 291

  Fly   298 -LYRQKTNLVCRY-KSTANTFLRLAPLKLEEISLDPFMAMYHEVLYDSEIRELKGQSMNMVNGYA 360
             ..|::..|.||| ....:..|.|:|.|.|:....|.:..||:::.|.||.::|..:...:....
 Frog   292 MTSRRQKRLFCRYFDGKKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRAT 356

  Fly   361 SQRNGTEIRDT----VVRYDWWSN-TSLVRERINQRIIDMTGFNFLKDEKLQIANYGLGTYFQPH 420
            .....|.:.:|    :.:..|.|. ...|..|:|:||..:||.:....|:||:||||:|..::||
 Frog   357 ISNPITGVLETAQYRITKSAWLSGYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPH 421

  Fly   421 FD----YSSDGFETPNITTLGDRLASILFYASEVPQGGATVFPEINVTVFPQKGSMLYWFNLHDD 481
            ||    |..|.|:  .:.| |:|:|:.|||.|:|..||||||||:...|:|:||:.::|:||.:.
 Frog   422 FDFLRKYEPDAFK--KLGT-GNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLES 483

  Fly   482 GKPDIRSLHSVCPVLNGDRWTLTKWVPMFPQMFSFPC 518
            |:.|..:.|:.||||.|::|...||:....|.|..||
 Frog   484 GEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32201NP_730346.2 P4Ha_N 36..165 CDD:285528 28/128 (22%)
P4Hc 341..507 CDD:214780 64/174 (37%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 15/86 (17%)
P4Hc 337..510 CDD:214780 65/175 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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