DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIP82 and Nkd2

DIOPT Version :9

Sequence 1:NP_572487.3 Gene:PIP82 / 31791 FlyBaseID:FBgn0024943 Length:1195 Species:Drosophila melanogaster
Sequence 2:NP_082462.3 Gene:Nkd2 / 72293 MGIID:1919543 Length:461 Species:Mus musculus


Alignment Length:21 Identity:14/21 - (66%)
Similarity:18/21 - (85%) Gaps:0/21 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QQFQHYPHHQHHHHHHHHHIH 26
            |:.:|:.||:|||||||||.|
Mouse   439 QRHEHHHHHEHHHHHHHHHFH 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIP82NP_572487.3 None
Nkd2NP_082462.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..106
Interaction with DVL1, DVL2 and DVL3. /evidence=ECO:0000269|PubMed:11356022 121..186
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..205
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..302
Interaction with TGFA. /evidence=ECO:0000250 307..396
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..414
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..461 13/19 (68%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849923
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.