DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32195 and nhr-246

DIOPT Version :10

Sequence 1:NP_730328.1 Gene:CG32195 / 317907 FlyBaseID:FBgn0052195 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:287 Identity:62/287 - (21%)
Similarity:101/287 - (35%) Gaps:99/287 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LESGKYILKDLLPAAAALGTNEKDMFEVLLPAMQ----AILEEAPKEI--GEHKLS----ADCLL 114
            ||..|  |.||:|     |.||..:|:::...::    ::..|..|||  .|.||:    ..|::
 Worm   140 LEDCK--LHDLIP-----GFNEDQLFKIVDELVKLHIFSLTTEKWKEIVPDESKLAMSGFLQCMV 197

  Fly   115 VEISAGKELYILEDLGALGYESFDRRQGLNLEEAKICVRKLAQFHGASKVLYEKKPELIQRLSPS 179
            .::.                                  |||||           .|||       
 Worm   198 ADVG----------------------------------RKLAQ-----------NPEL------- 210

  Fly   180 HYANGLNDRFAQALVLEGAEYAAEAFAEELPEISKKMKAQIPKAYTKRMRDVVDPNKSSLNAVIH 244
                        .::|...|...:.                ...|.::|||.. .|:...:.:.|
 Worm   211 ------------GVILSYVENTLDT----------------DPNYLQKMRDEY-INEERPSVICH 246

  Fly   245 GDPWLNNIMFDFVNKKATLVDFQNCYWGSPAIDLYFLFYTSLKPELLLNNQDELLNYYFDNLLET 309
            ||.|...|::|..:..|.:||:|..:.|||..||:.:..|....:........||::|::.|...
 Worm   247 GDLWAPQILWDKEDNIAGIVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVG 311

  Fly   310 LRHCGYKDTLPTFGQLKDEMKRCLFYG 336
            |:..|:|.|. |..::..|......||
 Worm   312 LKEKGFKTTW-TREEIDIEYNYSFIYG 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32195NP_730328.1 EcKL 37..315 CDD:397213 55/264 (21%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 55/261 (21%)

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