DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32191 and sgsh

DIOPT Version :9

Sequence 1:NP_001287102.1 Gene:CG32191 / 317903 FlyBaseID:FBgn0052191 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001116740.1 Gene:sgsh / 563849 ZFINID:ZDB-GENE-030131-4958 Length:511 Species:Danio rerio


Alignment Length:563 Identity:119/563 - (21%)
Similarity:201/563 - (35%) Gaps:160/563 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLCLQRVKSDESAAARRPNIIIIMADDMGFD-DVSFRGGREFLTPNIDALAYHGRLLDRLY-AP 71
            ||||.      :....|..|:::|:|||.||: ||  .......||::.||:....:....: :.
Zfish    12 LLLCF------DVGGCRSRNVLLIIADDGGFETDV--YNNTVVQTPHLRALSKRSLIFKNAFTSV 68

  Fly    72 AMCTPSRGALL-------SGRYPIHTGTQHFVISNEEPWALTLNATLMPEIFKEAGYSTNLVGKW 129
            :.|:|||..:|       :|.|.:|.|..||   |......:|     |.:.|.|...|.::||.
Zfish    69 SSCSPSRSTILTGLPQHQNGMYGLHQGVHHF---NSFDGVQSL-----PLLLKRANIHTGIIGKK 125

  Fly   130 HLGFSRPEYTPTRRGFDYHFGYWGAYIDYFQRRSKMPVANYSLGYDFRRNMELECRDRGVYVTDL 194
            |:|                               ..||..:...|....|..|:. .|.:....|
Zfish   126 HVG-------------------------------PGPVYPFDFAYTEETNSVLQV-GRNITKIKL 158

  Fly   195 LTAEAERLIKDHAD------KEQPLFLMLSHLAAHTANEDDPL----------------QAPEEE 237
            |   ..:..:.|.:      :|:|.||.::....|......|.                :.|:.|
Zfish   159 L---VRKFFQSHKEERSETKEERPFFLYVAFHDPHRCGHSQPQYGVFCEKFGNGESGMGRIPDWE 220

  Fly   238 IQKFS--------YIKD-PNRRKYAA----MISKLDQSVGRIITALSSTDQLENSIVIFYSDNGA 289
            .:.:|        :|.| |..|...|    .:|:|||.:|.::..|.......:::||:.||||.
Zfish   221 PKYYSPDQVKVPYFIPDTPAARADIAAQYTTVSRLDQGIGLVLEELRKAGFENDTLVIYSSDNGI 285

  Fly   290 PSVGMFSNTGSNFPLRGQK-----NTPWEGGVRVAGAIWSSGLQARGSIFRQPLYVADWLPTLSR 349
            |    |.|..:|....|.|     ::| |...|     |....||..|:......:.||......
Zfish   286 P----FPNGRTNLYGSGVKEPMLLSSP-EHQQR-----WGKLSQAYVSLLDITPTILDWFSLPYP 340

  Fly   350 AADIELDSSLKLDGIDLWPELSGSADAPHV-PREILHILDDVWRLSALQMGQWKYVNGTTASGRY 413
            :..:.:...::|.|..|.|.|........| ..:.||.:...:.:.::..|.::.::.       
Zfish   341 SYSLSMSQPVELTGRSLLPALISEPSWDTVFSSQSLHEVTMFYPMRSIHKGPYRLLHN------- 398

  Fly   414 DSVLTYRELDDLDPRDSRYAVTV----------RNSATSRALSRYDLRRLTQQRISLTRRLAAVR 468
               |.||....:| :|...:.|.          |.:...:.|:.|..|:..:             
Zfish   399 ---LHYRMPFPID-QDFYISPTFQDLLNRTQSGRPTGWFKTLNEYYYRQRWE------------- 446

  Fly   469 CGDLQRSCNPLLEECLYDILSDPCEQNNLVYSERHSDVLTALR 511
                           |:|:.:||.|:.||.....:|:||.:|:
Zfish   447 ---------------LFDVRTDPMEKVNLAGDLDYSEVLESLK 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32191NP_001287102.1 AslA 23..458 CDD:225661 104/494 (21%)
4-S 27..408 CDD:293753 93/430 (22%)
DUF4976 <478..540 CDD:303608 11/34 (32%)
sgshNP_001116740.1 SGSH 25..481 CDD:293751 114/544 (21%)
AslA 25..461 CDD:225661 109/529 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.