DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otu and Otud1

DIOPT Version :10

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_081991.1 Gene:Otud1 / 71198 MGIID:1918448 Length:454 Species:Mus musculus


Alignment Length:140 Identity:34/140 - (24%)
Similarity:62/140 - (44%) Gaps:8/140 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DQYLESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSY 85
            |:||..|..||.|...|.:.|:|.:::.:|..|.||.|:|.:.|.::......|...|.||...:
Mouse   274 DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEF 338

  Fly    86 MQDMSKPKTYGTMTELRAMSCLYRRNVIL-----YEPYNMGTSVVF---NRRYAENFRVFFNNEN 142
            :...::...:....||.||..:...|:.|     .|...:.|.:.:   ......:..:.:.:..
Mouse   339 IIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNG 403

  Fly   143 HFDSVYDVEY 152
            |:|:|:|..|
Mouse   404 HYDAVFDHSY 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU_ALG13-like 21..149 CDD:438590 32/135 (24%)
Tudor_TDRD13-like 336..389 CDD:410451
Otud1NP_081991.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..64
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..257
OTU_OTUD1 262..410 CDD:438584 32/135 (24%)
Cys-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 287..293 1/5 (20%)
His-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 342..352 0/9 (0%)
Variable-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 399..404 0/4 (0%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.