DRSC/TRiP Functional Genomics Resources

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Protein Alignment otu and otud6b

DIOPT Version :9

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_956519.1 Gene:otud6b / 393194 ZFINID:ZDB-GENE-040426-974 Length:293 Species:Danio rerio


Alignment Length:168 Identity:35/168 - (20%)
Similarity:63/168 - (37%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SGSR-QAPDPYDQYLESRGLYRKHTARDASSLFRVIAEQMYDTQML--HYEIRLECVRFMTLKRR 72
            |||| |......:.|..|.|..|..:.|...::|.:..|:.:..:.  ..|:|.:..::|   |.
Zfish   128 SGSRHQEGLKLREKLVERHLQIKEISSDGHCMYRAVEHQLTERGLALGLKELRDQTAQYM---RS 189

  Fly    73 IFEKEIP-------GD------FDSYMQDMSKPKTYGTMTELRAMS---------------CLYR 109
            ..:..:|       ||      |:.|..|::....:|...||:|:|               |   
Zfish   190 HADDFMPFLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQADSPC--- 251

  Fly   110 RNVILYEPYNMGTSVVFNRRYAENFRVFFNNENHFDSV 147
              :.:.|.|:.....:...|:|      :....|::||
Zfish   252 --ITIGEEYDKPKITLIYMRHA------YGLGEHYNSV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU 37..>115 CDD:303090 19/107 (18%)
TUDOR 335..392 CDD:197660
TAF12 <446..>564 CDD:304643
otud6bNP_956519.1 TMPIT 1..>67 CDD:285135
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
COG5539 2..282 CDD:227826 35/168 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..114
Cys-loop. /evidence=ECO:0000250 152..158 1/5 (20%)
OTU 154..278 CDD:280496 23/137 (17%)
Variable-loop. /evidence=ECO:0000250 219..229 1/9 (11%)
His-loop. /evidence=ECO:0000250 267..277 2/15 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578476
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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