DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)72Dp and GGH1

DIOPT Version :9

Sequence 1:NP_730119.1 Gene:l(3)72Dp / 317887 FlyBaseID:FBgn0263607 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_177987.1 Gene:GGH1 / 844202 AraportID:AT1G78660 Length:348 Species:Arabidopsis thaliana


Alignment Length:328 Identity:97/328 - (29%)
Similarity:158/328 - (48%) Gaps:37/328 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ALLAASEAGISS----------------PIIGVLTQEVYVDGLISR-HFDNKTSYIAASYVKYLE 61
            ::|..||:|...                |:||:|:..  .||...| ..|..::||||||||:.|
plant    27 SILLPSESGFDGSRSPVCSSPDPNLNYRPVIGILSHP--GDGASGRLTNDTSSTYIAASYVKFAE 89

  Fly    62 GAGARVVPIWIGRNRSYYDDLMRKINGVLLPGGATWFNQSNGYADAGEHLIHLAIELNDQGVFMP 126
            ..||||:|:............:..:|||:..||  |..:.: |.:..:.:...|:|.||.|...|
plant    90 AGGARVIPLIYNEPEEVLFQKLELVNGVIFTGG--WAKKYD-YFEIVKKIFTKALERNDAGEHFP 151

  Fly   127 VWGTCLGMELLVYKLANETEHRINCEATGMAVPMEFKEDYKK-SRLFASITDDVVDTMVKENVTY 190
            |:|.|||.||:...::...:.....:|...|..::|.::... ..||.....:::..:..:.:..
plant   152 VYGICLGFELMSIIISQNRDILERFDAEDNASSLQFVDNVNNDGTLFQRFPPELLKKLSTDCLVM 216

  Fly   191 HWHQFCYTEKDFERD-LLNETWRVMSLNHDWNGVEFISTVEHIKYPFYGVQFHPEKPLYEFTKTS 254
            ..|::..|..:|:.: .|:..:.:::...|.|...::|||:..:||..|.|:||||..:|:..::
plant   217 QKHKYGITPANFQANPALSSFFEILTTCIDENSKTYVSTVKAKRYPITGFQWHPEKNAFEWGSSA 281

  Fly   255 IPHTAAAVLSGQFFADFFVSEAR------ESNQSFSNATEQARTLIYNYKPEYTSILGSSYIQQY 313
            |||:..|:...|..|.:.|||||      ||.:..||       |||||||.|....|..|.:.|
plant   282 IPHSEDAIQVTQHAASYLVSEARKSLNRPESQKVLSN-------LIYNYKPTYCGYAGRGYDEVY 339

  Fly   314 LFT 316
            :||
plant   340 IFT 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72DpNP_730119.1 Peptidase_C26 26..244 CDD:285023 61/220 (28%)
GATase1_Glutamyl_Hydrolase 28..303 CDD:153218 87/283 (31%)
GGH1NP_177987.1 Peptidase_C26 55..271 CDD:285023 61/220 (28%)
GAT_1 57..329 CDD:294025 87/283 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 96 1.000 Domainoid score I2455
eggNOG 1 0.900 - - E1_KOG1559
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2881
Inparanoid 1 1.050 140 1.000 Inparanoid score I1792
OMA 1 1.010 - - QHG54943
OrthoDB 1 1.010 - - D877490at2759
OrthoFinder 1 1.000 - - FOG0002965
OrthoInspector 1 1.000 - - mtm1205
orthoMCL 1 0.900 - - OOG6_101559
Panther 1 1.100 - - O PTHR11315
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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