DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)72Dp and ggh

DIOPT Version :9

Sequence 1:NP_730119.1 Gene:l(3)72Dp / 317887 FlyBaseID:FBgn0263607 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_998487.1 Gene:ggh / 406624 ZFINID:ZDB-GENE-040426-2615 Length:312 Species:Danio rerio


Alignment Length:318 Identity:133/318 - (41%)
Similarity:195/318 - (61%) Gaps:28/318 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SISLLIFIGALLAASEAGISSPIIGVLTQEVYVDGLISRHFD---NKTSYIAASYVKYLEGAGAR 66
            ::|:..| |.|:..:|    .||||||.|:|         ||   ::.|||||||||:||.||||
Zfish    15 AVSIYNF-GPLIKTNE----RPIIGVLAQDV---------FDPKPDRNSYIAASYVKFLESAGAR 65

  Fly    67 VVPIWIGRNRSYYDDLMRKINGVLLPGGATWFNQSNGYADAGEHLIHLAIELNDQGVFMPVWGTC 131
            |||:.|.::...|..|.:.|||||.|||.... :|:||:.|......||:|.|..|.:.||||||
Zfish    66 VVPVMINKSEDEYSRLFKSINGVLFPGGGVSL-ESSGYSKAAGIFYRLALEANSNGDYFPVWGTC 129

  Fly   132 LGMELLVYKLANE--TEHRINCEATGMAVPMEFKEDYKKSRLFASITDDVVDTMVKENVTYHWHQ 194
            ||.|||....:.|  ..|   ...:|:|:|::|.||.|.||||....::::.::..|.:|.:.||
Zfish   130 LGFELLTLLTSGELLLSH---TNTSGIALPLDFTEDVKGSRLFKEFPEELMKSLATEPLTENSHQ 191

  Fly   195 FCYTEKDFERD-LLNETWRVMSLNHD-WNGVEFISTVEHIKYPFYGVQFHPEKPLYEFTKTSIPH 257
            :..|.::|..: .|.:.:||:|.|.| :|  :|:||:|...:|.|..|:||||..:|:|:..|||
Zfish   192 WSITTENFTANKKLKKFYRVLSTNTDGYN--KFVSTMEAYDFPIYATQWHPEKNAFEWTRPYIPH 254

  Fly   258 TAAAVLSGQFFADFFVSEARESNQSFSNATEQARTLIYNYKPEYTSILGSSYIQQYLF 315
            |.:|:.:..:.|:|||:|||::..||::..|:.:.||||||||||.| .|::.|.|.|
Zfish   255 TPSAIKTTFYMANFFVNEARKNLHSFASTEEEEKALIYNYKPEYTGI-QSAFEQTYFF 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72DpNP_730119.1 Peptidase_C26 26..244 CDD:285023 93/224 (42%)
GATase1_Glutamyl_Hydrolase 28..303 CDD:153218 120/281 (43%)
gghNP_998487.1 GATase1_Glutamyl_Hydrolase 33..300 CDD:153218 120/281 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590432
Domainoid 1 1.000 161 1.000 Domainoid score I3976
eggNOG 1 0.900 - - E1_KOG1559
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2881
Inparanoid 1 1.050 225 1.000 Inparanoid score I3479
OMA 1 1.010 - - QHG54943
OrthoDB 1 1.010 - - D539287at33208
OrthoFinder 1 1.000 - - FOG0002965
OrthoInspector 1 1.000 - - otm25109
orthoMCL 1 0.900 - - OOG6_101559
Panther 1 1.100 - - LDO PTHR11315
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5199
SonicParanoid 1 1.000 - - X1961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.