DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32152 and rmt3

DIOPT Version :10

Sequence 1:NP_001287079.2 Gene:CG32152 / 317885 FlyBaseID:FBgn0052152 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_595572.2 Gene:rmt3 / 2541248 PomBaseID:SPBC8D2.10C Length:510 Species:Schizosaccharomyces pombe


Alignment Length:425 Identity:103/425 - (24%)
Similarity:181/425 - (42%) Gaps:93/425 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EKLDNSKSANQTVKPENSDIKISLLQRPNPQDATQARSKTRVRSAGRIPAPPRKVPKELEDLDRM 171
            ::||:....:.|::          ::..||.|.::.....:::...::      :..:||::.:.
pombe   113 DELDSDFEDDNTLE----------IEVENPADVSKDAEIKKLKLQNQL------LISQLEEIRKD 161

  Fly   172 TSADFRHDTAARLDVMRNRQKDQAHMYFFQS----------------------VIHHQRHLIKDR 214
            ...:....|..:|.|...:..:.:  |:|:|                      .::|.:|:...:
pombe   162 KMNELTSQTTDQLSVTPKKADNDS--YYFESYAGNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGK 224

  Fly   215 TILVLCCGTGTLALMAAQMGAKRVYAVDYSKVTGYTTLVVRQNGYEGVITVMNGRMKDLKLPT-K 278
            |:|.:.||||.|::..|:.|||:|||||.|.:.........:||....||.:.|:::|:.||. |
pombe   225 TVLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMAISNAFENGLADQITFIRGKIEDISLPVGK 289

  Fly   279 VDGIICNWMGYCLLYESEILEVLEARDRWLKKGGFILPDLAALYLVASEEHKLKSERCNHWRNVY 343
            ||.||..||||.|.:||.|..||.||||:|...|.:.|....|.|.|:...:|..|..:.|.:||
pombe   290 VDIIISEWMGYALTFESMIDSVLVARDRFLAPSGIMAPSETRLVLTATTNTELLEEPIDFWSDVY 354

  Fly   344 GFNMNAIR--------------RYALAEPCVALTTGKKLLTMAHCVLRLDLKRARREDLFIDRNI 394
            ||.||.::              .|..|:|.|              ..|.::...:.:|:......
pombe   355 GFKMNGMKDASYKGVSVQVVPQTYVNAKPVV--------------FARFNMHTCKVQDVSFTSPF 405

  Fly   395 RLSVNREGYLECFLLFFEVQFSNSLNFKL------SC--------NPCLKSPFKSLWMQSVLFV- 444
            .|.::.||.|..|.|:|:..|:......:      :|        .|       :.|.|.||.: 
pombe   406 SLIIDNEGPLCAFTLWFDTYFTTKRTQPIPEAIDEACGFTTGPQGTP-------THWKQCVLLLR 463

  Fly   445 EQPFVMRKNIHYTGNLKFKTLKPNKFNEMEICIEF 479
            .:|| ::|.....|.:.|...|.|. .:::|.:.:
pombe   464 NRPF-LQKGTRVEGTISFSKNKKNN-RDLDISVHW 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32152NP_001287079.2 COG4076 185..>349 CDD:443253 64/186 (34%)
rmt3NP_595572.2 zf-C2H2_2 27..>80 CDD:463690
COG4076 197..>359 CDD:443253 59/161 (37%)
Blue background indicates that the domain is not in the aligned region.

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