Protein Alignment Nxf3 and nxf1a

DIOPT Version :9

• Sequence 1: NP_001287064.2
• Gene: Nxf3 / 317878
• FlyBaseID: FBgn0263232
• Length: 615
• Species: Drosophila melanogaster
• Sequence 2: XP_009306018.1
• Gene: nxf1a / 751719
• ZFINID: ZDB-GENE-060825-299
• Length: 642
• Species: Danio rerio
• Alignment Length: 535
• Identity: 120/535 - (22%)
• Similarity: 203/535 - (37%)
• Gaps: 127/535 - (23%)

  Fly   100 KWV------MMPIKVEIFNFKRSGPEDNMARGQFLLDNLLSANRLKRL---------QEEVAVIN 149
            :|:      :.||.....::...|.     :..|.|::..:|:.|.:|         |..|.::|
Zfish   158 RWLLTSLQNLCPIAFTPLHYTTEGD-----KVHFYLEDTTTASALSKLSRRILDSDGQRVVVLMN 217

  Fly   150 TCQ-----KIEVRVTPGLPKSMMCAQITDEFTTAIQEALRSRYEVDSRTLDLSRFHASPELSLHF 209
            :|.     |.|:|:               |....::..|..|::...::|||:.....|||..|.
Zfish   218 SCYFPPFLKSELRL---------------EDLELLKLCLSKRFDDSQKSLDLTSIRTDPELVSHN 267

  Fly   210 CP--LHMVKLLETVLVLSNHLFPHVTSLVLSNNYLCSLKAFAGNSQSFASLERLDISANRIQDLG 272
            ..  |:....::.|:.:.....|.:.||.||.|.|..|...........:|:.|::|.|.::...
Zfish   268 VDIILNRKNCMQAVIKIIQESIPELLSLNLSKNKLYKLDGLTELVNKAPNLQSLNLSCNELKSHC 332

  Fly   273 ELNYINKLSCKTIFLAGNGLA------KLSVDVIRKMLPQLKNVHG-------CVQLGESTEAVD 324
            ||:.:.......:.|.||.|.      ...:..::|..|:|..:.|       |.::    |...
Zfish   333 ELDKVKGFRLVELCLDGNPLCDRFKDQTTYISAVQKCFPRLLRLDGHVLSLPICFEV----ETSS 393

  Fly   325 NIP-------KSQQLQGGGTNGLKFCQDFISSYYTFFDDTEERFKLKKYYDDQAMFSLSVPVQLN 382
            |||       .|.::||       ..|.|:..||:.: |:.:|..|.:.|.:.|.|||.:|...|
Zfish   394 NIPLCKGSHFVSNEIQG-------LIQRFLEQYYSIY-DSGDRQPLLEAYHESACFSLCLPSISN 450

  Fly   383 ---YVYGYKLYNRNQKRQHSSFAQNAKLQVGRAALLLALSRLPLMHTDLENVGLDIQVFTSSLRI 444
               |...|...:||.|....|..:...|:..|..::..|:.||....|:.::.:|:..:.|:|..
Zfish   451 PSRYKLDYFKNSRNVKNIKDSPTRFRLLKHTRLTVVACLNELPKTQHDINSINVDVNAYASTLLA 515

  Fly   445 FTLTGYFKEI---SSDTLEPRRFQRTFVLQTSNSPGWLITNDMLCITSTMPDPKKTIKFKPETNM 506
            ||::|.|||:   |.|..  :.|.|.||...:.:.|..|.||.|.:.:|
Zfish   516 FTVSGVFKEVDDQSEDLF--KAFSRVFVTVPAQNSGLCIVNDELFVRNT---------------- 562

  Fly   507 INTDPSVEKINKPAVTVLDRKSKEDVQISRPLSGKELNPLNKAVQKMSLSQVDHLPSENFNDMPP 571
                 ::|:|.....|.....|...|            |:..|.|:..||....:...|
Zfish   563 -----TMEEIQCAFTTPTQSPSSSPV------------PILSAYQQEMLSAFSQMSEMN------ 604

  Fly   572 LVAIGPLTTGQNCLD 586
                  |...|.||:
Zfish   605 ------LQWSQKCLE 613

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nxf3	NP_001287064.2	leucine-rich repeat	191..231	CDD:275382	9/41 (22%)
		PPP1R42	<192..296	CDD:411060	27/111 (24%)
		leucine-rich repeat	232..257	CDD:275382	7/24 (29%)
		leucine-rich repeat	258..281	CDD:275382	6/22 (27%)
		NTF2_like	338..489	CDD:415585	46/156 (29%)
nxf1a	XP_009306018.1	Tap-RNA_bind	142..223	CDD:286271	13/69 (19%)
		leucine-rich repeat	249..291	CDD:275382	9/41 (22%)
		LRR_4	290..336	CDD:289563	14/45 (31%)
		leucine-rich repeat	292..317	CDD:275382	7/24 (29%)
		leucine-rich repeat	318..341	CDD:275382	6/22 (27%)
		leucine-rich repeat	342..372	CDD:275382	5/29 (17%)
		NTF2	413..561	CDD:238403	46/150 (31%)
		TAP_C	579..641	CDD:197882	12/59 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1051093at2759
OrthoFinder	1	1.000	-	-		FOG0000862
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10662
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.020