Protein Alignment Nxf3 and Nxf5

DIOPT Version :9

• Sequence 1: NP_001287064.2
• Gene: Nxf3 / 317878
• FlyBaseID: FBgn0263232
• Length: 615
• Species: Drosophila melanogaster
• Sequence 2: XP_038956086.1
• Gene: Nxf5 / 680025
• RGDID: 1596862
• Length: 621
• Species: Rattus norvegicus
• Alignment Length: 580
• Identity: 121/580 - (20%)
• Similarity: 222/580 - (38%)
• Gaps: 113/580 - (19%)

  Fly     5 ATFKSHEPDSRLIQNFKKHVNSQSP--LDDLRKNLNEKSKIREYVQELIGN-----EQQMGSVLD 62
            ::|:....:..|...|  |:::..|  |.|...|:.        :.:..|:     |||:.|.|:
  Rat     2 SSFQEVSGNKNLYDEF--HLDTVLPPQLQDNDGNMQ--------IMDANGDPQMLYEQQLKSSLE 56

  Fly    63 TISST-----------------------EEDHRVATVTG-----WSTVNIANCAGVSNSSIFVAL 99
            ::.|:                       ||.:|  ::.|     |..:.|.|....:...:...|
  Rat    57 SLESSYTFSVKEDCGTTYSACQEKTLSDEEMNR--SILGEVFERWFKITIPNGKKYNKMWLINLL 119

  Fly   100 K-WVMMPIKVEIFNFKRSGPEDNMARGQFLLDNLLSANRLKRLQEEVAVINTCQKIEVRVTPGLP 163
            : :..|......|.:.|:|.       ||.:.:..:|..|..:..:::.... :||.:.|.....
  Rat   120 QSYCSMGFTPVDFQYIRNGI-------QFFVQSTKTAVELMNINYQISDEEN-KKISIYVNSSSE 176

  Fly   164 KSMMCAQITDEFTTAIQEALRSRYEVDSRTLDLSRFHASPELSLHFCPLHMVK--LLETVLVLSN 226
            .:.:..::|.....:::.:::.||:|..:.|.|.:.....:|..|...:.:.:  .:...|.:..
  Rat   177 PASVHYKLTAAQMHSLKLSMKKRYDVSKKALYLGKLRFDQDLMDHGIDMFLNRRSCMTAALQIIQ 241

  Fly   227 HLFPHVTSLVLSNNYLCSLKAFAGNSQSFASLERLDISANRIQDLGELNYINKLSCKTIFLAGNG 291
            ..||.:.||.:|||.:..|...:...:....::.|::|.|.::...||..|..|:.:.::|.||.
  Rat   242 ENFPELLSLNVSNNKIYWLDGLSELIEKAPHVKTLNLSRNLLRTAWELEKIRGLNLEQLWLEGNP 306

  Fly   292 LAKL------SVDVIRKMLPQLKNV--------HGCV---------QLGESTEAVDNIPK-SQQL 332
            |...      .|..|....|:|.::        |.|:         .||.......::|. |..|
  Rat   307 LCSTFPDHSSYVSAILNYFPELSHLPTGFPAPFHTCLLFLFQSLLYLLGHHMSCPPSVPLISYFL 371

  Fly   333 QGG-----------------------GTNGLK-FCQDFISSYYTFFDDTEERFKLKKYYDDQAMF 373
            |.|                       |:..|| ....|:..||..: |..:|..|...|...|.|
  Rat   372 QDGRKLFPTIDINTLEIIKPRKESYKGSECLKNLLVQFMLQYYLIY-DYGDRHSLLNAYHANACF 435

  Fly   374 SLSV-----PVQLNYVYGYKLYNRNQKRQHSSFAQNAKLQVGRAALLLALSRLPLMHTDLENVGL 433
            ||::     ...::.:..|...|||.|...:||.:...|:..:..::..|..||....||.:..:
  Rat   436 SLAITFNSDKADMSSLEDYLKDNRNMKMLTNSFLRMQLLKHKKYNIVTCLHELPKTQHDLNSYVV 500

  Fly   434 DIQVFTSSLRIFTLTGYFKEISSDTL-EPRRFQRTFVLQTSNSPGWLITNDMLCITSTMP 492
            ||.|.|..:..|::.|.|||:...:. ..|.|.|||:|.........|.||.:.:.:..|
  Rat   501 DICVQTEKMICFSVNGVFKEVEGKSWGSVRAFTRTFILTPDRHFRLCIVNDEMILRNANP 560

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nxf3	NP_001287064.2	leucine-rich repeat	191..231	CDD:275382	6/41 (15%)
		PPP1R42	<192..296	CDD:411060	24/111 (22%)
		leucine-rich repeat	232..257	CDD:275382	6/24 (25%)
		leucine-rich repeat	258..281	CDD:275382	6/22 (27%)
		NTF2_like	338..489	CDD:415585	44/157 (28%)
Nxf5	XP_038956086.1	Tap-RNA_bind	97..177	CDD:401194	15/87 (17%)
		leucine-rich repeat	204..246	CDD:275382	6/41 (15%)
		leucine-rich repeat	247..272	CDD:275382	6/24 (25%)
		leucine-rich repeat	273..296	CDD:275382	6/22 (27%)
		leucine-rich repeat	297..327	CDD:275382	6/29 (21%)
		NTF2_like	408..556	CDD:415585	42/148 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1051093at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010