DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nxf3 and nxf2

DIOPT Version :10

Sequence 1:NP_729938.2 Gene:Nxf3 / 317878 FlyBaseID:FBgn0263232 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_524111.3 Gene:nxf2 / 39843 FlyBaseID:FBgn0036640 Length:841 Species:Drosophila melanogaster


Alignment Length:398 Identity:92/398 - (23%)
Similarity:155/398 - (38%) Gaps:75/398 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 IQEALRSRYEVDSRTLDLSRFHASPELSLHFCPLHMVKLLETVLVLSNHLFP---------HVTS 234
            ||:|:...|...:|.|:|.|||:...|......|...|:|..||.:::..|.         |...
  Fly   422 IQKAVSQCYVAQNRMLNLERFHSRECLKDVMVSLSSPKILTYVLSVASRKFMTTCSEIRLCHNKV 486

  Fly   235 LVLSNNYLCSLKAFAGNSQSFASLERLDISANRIQDLGELNYINKLSCKTIFLAGNGLAK----- 294
            |||...::..:         ...|..:|:|.|.:|||..::.:..|..|::.|.||.|.:     
  Fly   487 LVLDGAHVLGM---------MGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLP 542

  Fly   295 -LSVDVIRKMLPQLKNVHGCVQLGESTEAVD-NIPKSQQLQGG---GTNGLKFCQDFISSYYTFF 354
             ..|..::::.|||..:.|          || .....|.||..   .|...:....|:.:|...|
  Fly   543 SEYVRAVKEVFPQLTTLDG----------VDLQTNPGQSLQKNFLCDTGAYELVGAFLENYLREF 597

  Fly   355 DDTEERFKLKKYYDDQAMFSLS----------VPVQLNYVYGYKLYNRNQKRQHSSFAQNAKLQV 409
            ::.|.|..|.|||.:.::|:|:          .|..|..:..|..:.||.:.:..|.|.:. :..
  Fly   598 ENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNLRNKDYSKASDG-VFF 661

  Fly   410 GRAALLLALSRLPLMHTDLENVGLDIQVFTSSLRIFTLTGYFKEISSDTLEPR-----------R 463
            |...::..|.:||.:..|..::..|:..:.....:..:.|..::....|....           .
  Fly   662 GCTYIVEILLQLPRVTHDFHSLQTDVMHYNGKGAVIYVAGLLRDEPPSTRNGHGSKTDIGGVLLG 726

  Fly   464 FQRTFVLQTSNSPGWL--------ITNDMLCITSTMPDPKKT-IKFKPETNMINTDPSVEKINKP 519
            |.|.||:....:...|        |.|:.|.||    :|.|| |:.....|.  .|||..:..:.
  Fly   727 FSRQFVVTFDEANLGLGKRARRLKIANERLHIT----NPSKTAIRNAFSVNF--PDPSERQAEED 785

  Fly   520 AVTVLDRK 527
            ::.|.|.|
  Fly   786 SLDVKDHK 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nxf3NP_729938.2 leucine-rich repeat 191..231 CDD:275382 13/48 (27%)
LRR <229..>300 CDD:443914 19/85 (22%)
leucine-rich repeat 232..257 CDD:275382 3/24 (13%)
leucine-rich repeat 258..281 CDD:275382 7/22 (32%)
NTF2_like 338..489 CDD:471850 35/179 (20%)
nxf2NP_524111.3 PPP1R42 <206..284 CDD:455733
leucine-rich repeat 434..474 CDD:275382 13/39 (33%)
leucine-rich repeat 475..500 CDD:275382 4/33 (12%)
leucine-rich repeat 501..524 CDD:275382 7/22 (32%)
leucine-rich repeat 525..555 CDD:275382 6/29 (21%)
TAP_C 779..841 CDD:197882 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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