Protein Alignment Nxf3 and Nxf3

DIOPT Version :9

• Sequence 1: NP_001287064.2
• Gene: Nxf3 / 317878
• FlyBaseID: FBgn0263232
• Length: 615
• Species: Drosophila melanogaster
• Sequence 2: XP_008771632.1
• Gene: Nxf3 / 302591
• RGDID: 1564923
• Length: 571
• Species: Rattus norvegicus
• Alignment Length: 573
• Identity: 117/573 - (20%)
• Similarity: 218/573 - (38%)
• Gaps: 113/573 - (19%)

  Fly    31 DDLRKNLNEKSKIREYVQELIGNEQQMGSVLDTISSTEEDHRVATVTGWSTVNIANCAGVSNSSI 95
            |.:..|:.|.:|         ..|::|          |.|.:..|...|..|.|.  .|:....
  Rat    78 DQMNVNMEEGAK---------PPERKM----------ERDKQDDTSENWFKVTIP--FGIKYDK- 120

  Fly    96 FVALKWVM--------MPIKVEIFNFKRSGPEDNMARGQFLLDNLLSANRLKRLQEEVAVINTCQ 152
                ||::        :|.....|::::       .:..|.:|:...|..||.:.:::. ..|..
  Rat   121 ----KWMLNLIQSQCSIPFTPVQFHYEK-------MQATFFVDDPNIAFMLKAISDKIR-DETDN 173

  Fly   153 KIEVRVTP-GLPKSMMCAQITDEFTTAIQEALRSRYEVDSRTLDLSRFHASPELSLHFCPLHMVK 216
            ||.:.::| ..|.|:  .::..|.....:..:..:.:...|.|:..|.....:|:.:
  Rat   174 KISIFISPCDEPHSV--TELKSEKMDQKKLTMNQQCDTSQRILNRQRLSFDQDLTTY-------- 228

  Fly   217 LLETVLVLS--NHLFPHVTSLVLSNNYLCSLKAFAGNSQSFASLERLDISANRIQDLGELNYINK 279
              .|.||||  .::.|   ||.:|...:..     .||:.       .::..:..|:.|:..: |
  Rat   229 --PTDLVLSPRRYMTP---SLNISEEDVTQ-----ANSEG-------KMAKEQASDIEEICAV-K 275

  Fly   280 LSCKTIFLAGNGLAKLSVDVIRKMLPQLKNVHGCVQLGESTEAVDNIPKSQQLQGGGTNGLKFCQ 344
            .|..|.....:.    :::.|.::.|:|.::.|    .||.:.....|:.|:..  .|....|.:
  Rat   276 SSLSTTMPDKSS----NINSILELFPKLLSLDG----QESCKPALCGPEDQKTI--STYKRSFFE 330

  Fly   345 ---------DFISSYYTFFDDTEERFKLKKYYDDQAMFSLSVP-----VQLNYVYGYKLYNRNQK 395
                     .|:..||..:|:.:....|..|:.| |.|||:||     :..:.|..|..|:|:.|
  Rat   331 SESIKTLVLQFLQQYYFIYDNGDREGLLNAYHAD-ACFSLTVPFSTMDLSASSVCEYVKYSRSMK 394

  Fly   396 RQHSSFAQNAKLQVGRAALLLALSRLPLMHTDLENVGLDIQVFTSSLRIFTLTGYFKEISSDTLE 460
            .....:.:...|:..:..::..|..||....||.:..:||...|.....|:::|.|||:...:..
  Rat   395 VLKDPYMRKQLLKHKKCDIIHFLRALPKTQHDLTSFSVDICFQTEKTLCFSVSGLFKEVEGSSQG 459

  Fly   461 P-RRFQRTFVLQTSNSPGWLITNDMLCITSTMPDPKKTIKFKPETNMINTD-----PSVEKINKP 519
            . ..|.|.||....||.        |||.:.....:....|...:|.::|.     ||:.:..:.
  Rat   460 CFHAFTRIFVATWDNSD--------LCIINDKLSVRNVYGFPSASNAVDTCSSSRLPSLSQDQQQ 516

  Fly   520 AVTVLDRKSKEDVQISRPLSGKELNPLNKAVQKMSLSQV-DHLPSENFNDMPP 571
            .:.....:|..:|:.|:.....:....|||:|..:|.:| |.:|.:......|
  Rat   517 MMPTFCSQSGVNVERSQKCLHDDQWNYNKAIQSFALLKVKDTVPEDKTTHTSP 569

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nxf3	NP_001287064.2	leucine-rich repeat	191..231	CDD:275382	9/41 (22%)
		PPP1R42	<192..296	CDD:411060	20/105 (19%)
		leucine-rich repeat	232..257	CDD:275382	5/24 (21%)
		leucine-rich repeat	258..281	CDD:275382	3/22 (14%)
		NTF2_like	338..489	CDD:415585	42/165 (25%)
Nxf3	XP_008771632.1	Tap-RNA_bind	104..186	CDD:286271	15/89 (17%)
		leucine-rich repeat	211..250	CDD:275382	5/38 (13%)
		leucine-rich repeat	269..298	CDD:275382	8/30 (27%)
		NTF2_like	333..488	CDD:298832	37/168 (22%)
		TAP_C	503..563	CDD:197882	14/65 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1051093at2759
OrthoFinder	1	1.000	-	-		FOG0000862
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10662
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.020