DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32112 and Abhd18

DIOPT Version :10

Sequence 1:NP_729820.2 Gene:CG32112 / 317860 FlyBaseID:FBgn0052112 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001020210.2 Gene:Abhd18 / 499602 RGDID:1563987 Length:464 Species:Rattus norvegicus


Alignment Length:508 Identity:228/508 - (44%)
Similarity:313/508 - (61%) Gaps:71/508 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKLDSIYRRMLITRFFEKGWGKPENLRKVFQFRKVISSRESCFKLVPRDYPVEITKKEIGAESTL 67
            ||||.:|||:|:|:.|.:|||:||:|:::|:|||:|.:||.|..||..||||.|.|.|..::..:
  Rat     4 SKLDILYRRLLLTKLFIRGWGRPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKVEEQSDCKI 68

  Fly    68 IEGQFKTPMELHMPGVVPEESQQAHFQLLIPNKWKNEKHKPICIHLAGTGDHFFWRRRNFIAKPL 132
            ::|.|.:||..::||::|.||..|.||.::|.:| |.:::|:||||||||||.:||||..:|:|:
  Rat    69 LDGHFVSPMAHYVPGIMPIESVIARFQFIVPKEW-NSRYRPVCIHLAGTGDHHYWRRRTLMARPM 132

  Fly   133 LKDANIGSIILENPFYGLRKPNNQTRSNLHNVSDIFVMGGCLILECLVLFHWCERNGFGPLGVTG 197
            :|:|.:.|::||||:||.|||.:|.||:|.||||:|||||.||||...|.||.||.|:||||:||
  Rat   133 IKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALILESAALLHWLEREGYGPLGMTG 197

  Fly   198 LSMGGHMASLAATNWPKPLVLVPCLSWSTASAVFTTGVMSQSINWDMLETQYFSDGQYRERLSKM 262
            :||||||||||.:|||||:.|:|||||||||.||||||:|:||||..||.||::...|.|.:..|
  Rat   198 ISMGGHMASLAVSNWPKPMPLIPCLSWSTASGVFTTGVLSKSINWRELEKQYYTQTVYEEEIIHM 262

  Fly   263 VTVI-DDAFSAGQSFIQNFNQSLQELKEDISDTRKIHATENSNTCGDKYETQGICPQEDSSIFLS 326
            :... .|:|..|..|:::|..:                                   ||      
  Rat   263 LEYCGTDSFKMGHEFMKHFPSN-----------------------------------ED------ 286

  Fly   327 KSLKNTKLDSENLTIDAKDALSQKVAIETEETSKDSGSTLTNLMKFILPLSAQSKTDKIDITKT- 390
             .|.|..|.|..|.:|.:|.:......|...:.|.|.|..:....    |...:|.::::.|.| 
  Rat   287 -KLTNLNLVSRTLNLDMRDQVVSPKHAECHHSGKASISATSKGQL----LQDTAKVERLNQTLTT 346

  Fly   391 ----------------------NWWEREALQFMRGMMDECTHLKNFSVPFDTSLIIAVCAKDDAY 433
                                  :..::|:|.||:|:||||||:.|||||.|.||||.|.||:|||
  Rat   347 NKSCFASYNPQSLHLLSREQRRSNLQKESLIFMKGVMDECTHVANFSVPVDPSLIIVVQAKEDAY 411

  Fly   434 VPREGCSSLEEIWPGAEVRYLDAGHVSAYVLHQKLFRSCIIEAFERAKKIYEN 486
            :||.|..||:|||||.|:|||:.||:|||:..|.|||..|.:||||....|.|
  Rat   412 IPRTGVRSLQEIWPGCEIRYLEGGHISAYLFKQGLFRQAIYDAFERFLHKYAN 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32112NP_729820.2 ABHD18 15..479 CDD:370661 216/487 (44%)
Abhd18NP_001020210.2 ABHD18 16..457 CDD:370661 216/487 (44%)

Return to query results.
Submit another query.