DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32110 and senp3b

DIOPT Version :10

Sequence 1:NP_729837.1 Gene:CG32110 / 317858 FlyBaseID:FBgn0052110 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001077311.2 Gene:senp3b / 565123 ZFINID:ZDB-GENE-030131-6714 Length:545 Species:Danio rerio


Alignment Length:384 Identity:97/384 - (25%)
Similarity:160/384 - (41%) Gaps:105/384 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 RRFRRSLFLRSNYIEQFRRWTDQK---NKLNRKRLNEAHQLCLKAKHER-IACE----------- 161
            ||.|.|..||:..::.::.|..|.   ..|..:|.....|..|.|..:| ..|:           
Zfish   169 RRLRSSARLRNRLVQNWKTWRQQAQWVGTLGYRRARRWRQYSLYASKKREKGCDTKGSTLRGLVT 233

  Fly   162 ---------------------------IDRYKKLILKQSVHVIE-----------------DIRI 182
                                       :..|..:.:|.::..||                 |:|.
Zfish   234 TSERETENQFSAYNGYGDSQSVSSLSGVREYLSMPMKPTIQRIEMTLTEEHKAYVHGLIEDDLRK 298

  Fly   183 SSELIPLTKEHHDRLMEL-------------SKYPLQQVI-----------VAKFNLD-----IC 218
            ...|||:   |.|.:.|.             .|..:|.:|           |..|.::     :.
Zfish   299 YGSLIPV---HADDIAEQLQSIFNEDFSQTHRKMAVQHLIQSYQRSSGTAMVKGFRVNYKRHVLT 360

  Fly   219 GSDIKILTSGGWLNDKIINFYMNLLVERSEKRPGTVP-SVYAMSTFFVPRLLQSGFDGVKRWTRK 282
            ..|:..|....||||:::|.|.:|:::       :|| .|:..::||..:|...|:|||||||:.
Zfish   361 MDDLSTLYGQNWLNDQVMNMYGDLVMD-------SVPEKVHFFNSFFYDKLRTKGYDGVKRWTKN 418

  Fly   283 VDLFSMDLILVPVHQMLVHWCLVIIDLPAKTMLYYNSRGRGDPNLMRALVKYLQMES--EDKLGL 345
            ||:|..||:|:|:| :.|||.||.:|:..:::.|::|:...:....:.:.||||.|:  ::|...
Zfish   419 VDIFQKDLLLIPIH-LEVHWSLVSVDIKRRSITYFDSQRTLNRRCPKHIFKYLQAEAMIKEKRDF 482

  Fly   346 CLDTSEFRIEDAQNVPQQDNMNDCGVFVCMFAEYLTRDAPITFSKKDMKYFRTKMVLEL 404
            ......|   ...||.:|:|.:|||.||..:.:.|....|.:||::||...|..|..||
Zfish   483 LTGWKGF---FKMNVGRQNNDSDCGAFVLQYCKCLALGQPFSFSQQDMPKLRRMMYKEL 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32110NP_729837.1 Peptidase_C48 230..400 CDD:397169 60/172 (35%)
senp3bNP_001077311.2 SENP3_5_N <282..359 CDD:466160 13/79 (16%)
Peptidase_C48 371..543 CDD:397169 63/179 (35%)

Return to query results.
Submit another query.