Protein Alignment Vha16-3 and VMA16

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_011891.1
• Gene: VMA16 / 856421
• SGDID: S000001068
• Length: 213
• Species: Saccharomyces cerevisiae
• Alignment Length: 155
• Identity: 48/155 - (30%)
• Similarity: 82/155 - (52%)
• Gaps: 14/155 - (9%)

  Fly    15 FFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLI 79
            :.:.::|.|..:..|.:|||:|...:|:.:....|..|.:..|::|.::...::|||||:::::.
Yeast    57 YMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVF 121

  Fly    80 AGSL-----------SDSYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQPRLFVG 133
            :..|           |:.||   ||....||::||.:.|..|.|:||.|.......|....|||.
Yeast   122 SSKLTVATAENMYSKSNLYT---GYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVK 183

  Fly   134 MILILIFAEVLGLYGLIVAIYLYTK 158
            :::|.||..:|||.||||.:.:..|
Yeast   184 ILVIEIFGSILGLLGLIVGLLMAGK 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	33/115 (29%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	26/64 (41%)
VMA16	NP_011891.1	ATP-synt_Vo_c_ATP6F_rpt1	59..121	CDD:349417	17/61 (28%)
		ATP-synt_Vo_c_ATP6F_rpt2	141..>192	CDD:349418	20/53 (38%)