DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha16-3 and OLI1

DIOPT Version :10

Sequence 1:NP_729706.1 Gene:Vha16-3 / 317846 FlyBaseID:FBgn0028667 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_009319.1 Gene:OLI1 / 854584 SGDID:S000007274 Length:76 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:22/66 - (33%)
Similarity:34/66 - (51%) Gaps:7/66 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 HLAAGLS-VGFAGLAAGFAIGIVGDAGVRGTAQQPRL----FVGMILILIFAEVLGLYGLIVAIY 154
            ::.||:| :|..|  ||..|.||..|.:.|.::.|.:    |...||....:|..||:.|:|:..
Yeast     9 YIGAGISTIGLLG--AGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFL 71

  Fly   155 L 155
            |
Yeast    72 L 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-3NP_729706.1 V_ATP_synt_C 16..121 CDD:130170 11/26 (42%)
ATP-synt_Vo_c_ATP6C_rpt2 91..156 CDD:349416 22/66 (33%)
OLI1NP_009319.1 ATP-synt_Fo_c_ATP5G3 8..72 CDD:349422 21/64 (33%)

Return to query results.
Submit another query.