Protein Alignment Vha16-3 and atp6v0b

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001017064.1
• Gene: atp6v0b / 549818
• XenbaseID: XB-GENE-997920
• Length: 205
• Species: Xenopus tropicalis
• Alignment Length: 154
• Identity: 48/154 - (31%)
• Similarity: 86/154 - (55%)
• Gaps: 10/154 - (6%)

  Fly    15 FFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLI 79
            :.:.::|...:|..|.:|||:|...:|:.|....|..|.:..|:::.::....:||||::::::|
 Frog    47 YMWANLGIGLSISLSVVGAAWGIYITGSSILGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111

  Fly    80 A-------GSLSDSYTIRK---GYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 134
            :       |:..::...|.   |:....|||:|||:.|..|..:||||.......||.|.|||.:
 Frog   112 SNMAEQFKGTTPEAIGSRNYHAGFSMFGAGLTVGFSNLFCGICVGIVGSGAALADAQNPSLFVKI 176

  Fly   135 ILILIFAEVLGLYGLIVAIYLYTK 158
            :::.||...:||:|:||||...:|
 Frog   177 LIVEIFGSAIGLFGVIVAILQTSK 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	32/114 (28%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	28/67 (42%)
atp6v0b	NP_001017064.1	ATP-synt_Vo_c_ATP6F_rpt1	49..111	CDD:349417	16/61 (26%)
		ATP-synt_Vo_c_ATP6F_rpt2	133..197	CDD:349418	28/63 (44%)