Protein Alignment Vha16-3 and vma16

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_594516.1
• Gene: vma16 / 2541999
• PomBaseID: SPAC2C4.13
• Length: 199
• Species: Schizosaccharomyces pombe
• Alignment Length: 162
• Identity: 53/162 - (32%)
• Similarity: 83/162 - (51%)
• Gaps: 20/162 - (12%)

  Fly    14 SFFFGS------------MGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAG 66
            ||.|||            :|.||.:.|..:|||:|....||.|...||..|.:..|::|.::...
pombe    30 SFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCE 94

  Fly    67 IIAIYGLVVSVLIAGSLSD-----SYTIRKGYIHLA---AGLSVGFAGLAAGFAIGIVGDAGVRG 123
            ::|||.|:::::.:..::|     .||....|...|   .|::||...|..|..:||.|.:....
pombe    95 VVAIYSLIIAIVFSAKINDINPAGFYTKSHYYTGFALFWGGITVGLCNLICGVCVGITGSSAALA 159

  Fly   124 TAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 155
            .||...|||.::::.||..||||:||||.:.:
pombe   160 DAQDASLFVKVLVVEIFGSVLGLFGLIVGLLI 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	36/124 (29%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	25/68 (37%)
vma16	NP_594516.1	ATP-synt_Vo_c_ATP6F_rpt1	45..107	CDD:349417	20/61 (33%)
		ATP-synt_Vo_c_ATP6F_rpt2	127..191	CDD:349418	24/63 (38%)