Protein Alignment Vha16-3 and vma11

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_593600.1
• Gene: vma11 / 2541780
• PomBaseID: SPAC732.01
• Length: 162
• Species: Schizosaccharomyces pombe
• Alignment Length: 150
• Identity: 92/150 - (61%)
• Similarity: 119/150 - (79%)
• Gaps: 2/150 - (1%)

  Fly    11 PAYSFFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVV 75
            |.||.|||..|..::::||.|||.||||.:|.||||:...|||::|||:|||||:|||.:||||:
pombe     7 PIYSSFFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVM 71

  Fly    76 SVLIAGSLS--DSYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILIL 138
            ||||||.:|  :.|::..|:|||:|||:||..|:|||:|||:|||.||:...:|.|:||.|:|||
pombe    72 SVLIAGDMSPDNDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLIL 136

  Fly   139 IFAEVLGLYGLIVAIYLYTK 158
            |||||||||||||.:.|.||
pombe   137 IFAEVLGLYGLIVGLILQTK 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	63/106 (59%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	42/64 (66%)
vma11	NP_593600.1	PRK13469	12..119	CDD:469780	63/106 (59%)
		ATP-synt_Vo_c_ATP6C_rpt2	87..153	CDD:349416	42/65 (65%)