Protein Alignment Vha16-3 and vha-4

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_495659.1
• Gene: vha-4 / 174272
• WormBaseID: WBGene00006913
• Length: 214
• Species: Caenorhabditis elegans
• Alignment Length: 153
• Identity: 43/153 - (28%)
• Similarity: 78/153 - (50%)
• Gaps: 16/153 - (10%)

  Fly    17 FGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLIAG 81
            :..:|...::..|.|||.:|...:|:.|....|..|.:..|:::.::....:||:|::::.:..|
 Worm    51 WAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVG 115

  Fly    82 SLSD----------------SYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQPRL 130
            .|::                :..:..||:....||:||.:.|..|.|:||||.......|..|.|
 Worm   116 KLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPAL 180

  Fly   131 FVGMILILIFAEVLGLYGLIVAI 153
            ||.:::|.|||..:||:|:|:.|
 Worm   181 FVKILIIEIFASAIGLFGMIIGI 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	29/119 (24%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	27/63 (43%)
vha-4	NP_495659.1	ATP-synt_Vo_c_ATP6F_rpt1	51..113	CDD:349417	14/61 (23%)
		ATP-synt_Vo_c_ATP6F_rpt2	141..205	CDD:349418	27/63 (43%)