Protein Alignment Vha16-3 and Atp5mc2

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2 / 171082
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 118
• Identity: 36/118 - (30%)
• Similarity: 52/118 - (44%)
• Gaps: 25/118 - (21%)

  Fly    43 GIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLIAGSLSDSYTIRKGYIHLAAG-LSVGFAG 106
            |::.:||.||   :.|:||.......||               |..|......:.|| .:||.||
  Rat    40 GLSCLAVRRP---LTSLIPSRSFQTSAI---------------SRDIDTAAKFIGAGAATVGVAG 86

  Fly   107 LAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 155
            ..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
  Rat    87 SGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	23/78 (29%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	24/70 (34%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	25/73 (34%)