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Protein Alignment Vha16-3 and Atp5mc2
DIOPT Version :9
Sequence 1: | NP_001189086.1 |
Gene: | Vha16-3 / 317846 |
FlyBaseID: | FBgn0028667 |
Length: | 158 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_598240.1 |
Gene: | Atp5mc2 / 171082 |
RGDID: | 620051 |
Length: | 141 |
Species: | Rattus norvegicus |
Alignment Length: | 118 |
Identity: | 36/118 - (30%) |
Similarity: | 52/118 - (44%) |
Gaps: | 25/118 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 GIAAMAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLIAGSLSDSYTIRKGYIHLAAG-LSVGFAG 106
|::.:||.|| :.|:||.......|| |..|......:.|| .:||.||
Rat 40 GLSCLAVRRP---LTSLIPSRSFQTSAI---------------SRDIDTAAKFIGAGAATVGVAG 86
Fly 107 LAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 155
..|| ||.|..:.:.|.|:.| :||...||....:|.:||:.|:||..:
Rat 87 SGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 137
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0636 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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