DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-3 and Atp5mc1

DIOPT Version :10

Sequence 1:NP_729706.1 Gene:Vha16-3 / 317846 FlyBaseID:FBgn0028667 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_031532.2 Gene:Atp5mc1 / 11951 MGIID:107653 Length:136 Species:Mus musculus


Alignment Length:63 Identity:23/63 - (36%)
Similarity:33/63 - (52%) Gaps:6/63 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 AAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 155
            |...:||.||..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
Mouse    72 AGAATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-3NP_729706.1 V_ATP_synt_C 16..121 CDD:130170 10/23 (43%)
ATP-synt_Vo_c_ATP6C_rpt2 91..156 CDD:349416 23/63 (37%)
Atp5mc1NP_031532.2 ATP9 62..136 CDD:164765 23/63 (37%)

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