DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and Elovl1

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001037740.1 Gene:Elovl1 / 679532 RGDID:1587151 Length:279 Species:Rattus norvegicus


Alignment Length:245 Identity:90/245 - (36%)
Similarity:133/245 - (54%) Gaps:11/245 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DERTRNWPLVDSFWTVPVLLSIYLLMVRY-----APKWTTRHKPLQLRAPLFCHSLAMVFLNGYI 75
            |.|.:|:||:.|    |:|::..||...|     .|:.....||.|||..:..::.::|.|:.||
  Rat    16 DPRIQNYPLMGS----PLLITSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVTLSLYI 76

  Fly    76 CLELYAATRDLDYNFGCQPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQKWSQLSFLH 140
            ..|...:.....|.:.|.|...|.:|..:|:.:..|.|.:||::|..||..||||:|..|::|||
  Rat    77 VYEFLMSGWLSTYTWRCDPVDFSNNPEALRMVRVAWLFMLSKVIELMDTVIFILRKKDGQVTFLH 141

  Fly   141 VYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYLTGLQL 205
            |:|||.:....|..||..|.|.....|||||.||::||.||.||.|||..|.:||||:::|.:||
  Rat   142 VFHHSVLPWSWWWGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALGPVAQPYLWWKKHMTAIQL 206

  Fly   206 VQFTIIFFWASQ-MLVRGCEYGTWITLSMA-IYSLPFLFMFGKFYMQKYT 253
            :||.::....|| ..:..|.|...|.:.:. :|...|..:|..|:...||
  Rat   207 IQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTIFFILFSNFWYHSYT 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 87/238 (37%)
Elovl1NP_001037740.1 ELO 23..262 CDD:460083 87/238 (37%)

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