DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68alpha and elovl6

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001017257.2 Gene:elovl6 / 550011 XenbaseID:XB-GENE-942876 Length:265 Species:Xenopus tropicalis


Alignment Length:280 Identity:76/280 - (27%)
Similarity:114/280 - (40%) Gaps:56/280 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLGISFHPFPDQPDER------TRNWPLVDSFWTVPVLLSIYLLMVRYAPKWTTRHKPLQLRA 59
            |::|.:..:.|..|.:|.      ..||.  .|| ....|.:.::...|:..|   :.:..:||.
 Frog     3 MSALTLQEYEFEKQFNENEAIQWMQENWK--KSF-LFSALYAAFIFGGRHLMK---QREKFELRK 61

  Fly    60 PLFCHSLAMVFLNGYICLELYAATRDLDYNF------GCQP--CRVSF--DPHEMRLTKAFW--W 112
            ||...||::...:      ::.|.|...|..      |.:.  |..||  .|     ...||  .
 Frog    62 PLILWSLSLAVFS------IFGAVRTGAYMLYILMTKGLKQSVCDQSFYYGP-----VSKFWAYA 115

  Fly   113 FYISKILEFADTAFFILRQKWSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIM 177
            |.:||..|..||.|.|||::  :|.|||.|||.|:.::.|...|.|..|..:...| |..||.:|
 Frog   116 FVLSKAPELGDTIFIILRKQ--KLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTM-NYGVHAVM 177

  Fly   178 YGYYALSVLGPRVQRFLWWKRYLTGLQLVQFT----------IIFFWASQMLVRGCEYGTWITLS 232
            |.||||...|.||.|     ::...:.|.|.|          ::|.|..|   ..|.......:.
 Frog   178 YSYYALRAAGFRVSR-----KFAMLITLSQITQMIIGCVVNYLVFSWMQQ---GQCPSHVQNIVW 234

  Fly   233 MAIYSLPFLFMFGKFYMQKY 252
            .:|..|.:..:|..|:.:.|
 Frog   235 SSIMYLSYFVLFCHFFFEAY 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 69/252 (27%)
elovl6NP_001017257.2 ELO 25..262 CDD:460083 71/258 (28%)

Return to query results.
Submit another query.