DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and Elovl2

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_038951934.1 Gene:Elovl2 / 498728 RGDID:1308605 Length:296 Species:Rattus norvegicus


Alignment Length:247 Identity:94/247 - (38%)
Similarity:142/247 - (57%) Gaps:7/247 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DERTRNWPLVDSFWTVPVLLSIYLLMVRYAPKWTTRHKPLQLRAPLFCHSLAMVFLNGYICLELY 80
            |.|.|.|.|:||:.....|..:|||.:....|:......|.||..|..::|.:..|:.|:.:||.
  Rat    23 DSRVRGWFLLDSYLPTFTLTIVYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLVELV 87

  Fly    81 AATRDLDYNFGCQPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQKWSQLSFLHVYHHS 145
            .::.:..||..||... |....::|:.|..||:|.||::||.||.||:||:|.||::|||||||:
  Rat    88 LSSWEGGYNLQCQNLD-SAGEGDIRVAKVLWWYYFSKLVEFLDTIFFVLRKKTSQITFLHVYHHA 151

  Fly   146 TMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYLTGLQLVQFTI 210
            :||...|.::.|:|.|.::....:|||:||:||.||.|||. |.:.|:||||:|||..|||||.:
  Rat   152 SMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF-PSMHRYLWWKKYLTQAQLVQFVL 215

  Fly   211 IFFWASQMLVRGCEYGTWITLSMAIYSLPFLFMFGKFYMQKYTVSAVGKKPI 262
            ........:|:.|.:.....:..:.|.:..:.:|..||:|.|.     |||:
  Rat   216 TITHTLSAVVKPCGFPFGCLIFQSSYMMTLVILFLNFYIQTYR-----KKPM 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 87/236 (37%)
Elovl2XP_038951934.1 ELO 30..264 CDD:395916 90/240 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352901
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 1 1.000 - - mtm8964
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.750

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