DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68alpha and elovl1b

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_998581.2 Gene:elovl1b / 406725 ZFINID:ZDB-GENE-040426-2755 Length:320 Species:Danio rerio


Alignment Length:240 Identity:91/240 - (37%)
Similarity:139/240 - (57%) Gaps:3/240 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DERTRNWPLVDSFWTVPVLLSIYLLMVRYA-PKWTTRHKPLQLRAPLFCHSLAMVFLNGYICLEL 79
            |.|.:::||::|.:::..:|..||..|.|| ||:....||.||:..:..::|::|.|:.||..|.
Zfish    21 DPRLKDYPLMESPFSMTAILLAYLFFVLYAGPKFMANRKPFQLKEAMIIYNLSLVGLSAYIVYEF 85

  Fly    80 YAATRDLDYNFGCQPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQKWSQLSFLHVYHH 144
            ..:.....|.:.|.||..|..|..:|:.:..|.|..||.:|..||.||:||:|.||::|||::||
Zfish    86 LMSGWATGYTWRCDPCDYSNSPQGLRMARVAWLFLFSKFIELMDTVFFVLRKKHSQITFLHIFHH 150

  Fly   145 STMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYLTGLQLVQFT 209
            |.|....|..:..:|.|.....||:||.||:|||.||.||..|||.|:|||||:|:|.:||.||.
Zfish   151 SFMPWTWWWGVSIVPGGMGSFHAMVNSCVHVIMYFYYGLSAAGPRFQKFLWWKKYMTAIQLTQFV 215

  Fly   210 IIFFWASQ-MLVRGCEYGTWITLSMA-IYSLPFLFMFGKFYMQKY 252
            ::....|| ..:..|::...:.:.:. :|...|..:|..|:.|.|
Zfish   216 LVSLHVSQWYFMESCDFQVPVIIHLIWLYGTFFFVLFSNFWYQAY 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 89/233 (38%)
elovl1bNP_998581.2 ELO 28..268 CDD:460083 89/233 (38%)

Return to query results.
Submit another query.