DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and Elovl3

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001101072.1 Gene:Elovl3 / 309449 RGDID:1307263 Length:271 Species:Rattus norvegicus


Alignment Length:248 Identity:68/248 - (27%)
Similarity:116/248 - (46%) Gaps:35/248 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLVDSFWTVP-VLLSIYLLMVRYAPKWTTRHKPLQLRAPLFCHSLAMVFLNGYICLELYAATRDL 86
            |.::.:|... .::.:|||::.:...:....|...|:.||...|..:...:....|.::.....:
  Rat    29 PFLEEYWVSSFFIVLVYLLLIIFGQNYMKTRKGFSLQRPLILWSFCLAIFSILGTLRMWKFMGTV 93

  Fly    87 DYNFGCQPCRVSFDPHEMRLTKAFW-W-FYISKILEFADTAFFILRQKWSQLSFLHVYHHSTMFV 149
            .:..|.:. .|.|..:.......|| | |.:||::|..||||.|||::  .|.|:|.|||||:.:
  Rat    94 LFTMGLKQ-TVCFTDYTNDAIVKFWSWVFLLSKVVELGDTAFIILRKR--PLIFVHWYHHSTVLL 155

  Fly   150 FCWILIK-WMPTGSTYVPAMINSFVHIIMYGYY---ALSVLGPRVQRFLWWKRYLTGLQLVQ--- 207
            |.....| .:|:|..::  .:|..||.:||.||   |..|..|.:...:     :|.||::|   
  Rat   156 FTSFGYKNKVPSGGWFM--TMNLGVHSVMYTYYTMKAAKVKHPNILPMV-----ITSLQILQMVL 213

  Fly   208 ---FTII-FFWASQMLVRGC----EYGTWITLSMAIYSLPFLFMFGKFYMQKY 252
               |.|: :.|..:   |||    |:..|   |..:|...|: :|.:|:.:.|
  Rat   214 GTIFGILNYIWRQE---RGCYTTSEHFFW---SFVLYGTYFI-LFAQFFHRAY 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 68/248 (27%)
Elovl3NP_001101072.1 ELO 30..266 CDD:279492 67/247 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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