DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo2

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_593930.2 Gene:elo2 / 2542505 PomBaseID:SPAC1B2.03C Length:327 Species:Schizosaccharomyces pombe


Alignment Length:295 Identity:74/295 - (25%)
Similarity:125/295 - (42%) Gaps:77/295 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HPFP-------DQPDERTRNW------------PLVDSFW-TVPVLLSIYLLMVRYAPKWTTRHK 53
            |||.       :|...:|..|            |:  |.| :|.|.::.|.:::.......|..|
pombe    11 HPFGVDLWHLFEQLSIKTIGWNPSEFEYIPGKTPM--SQWSSVIVSITAYYVIILSGRAIMTNRK 73

  Fly    54 PLQLRAPLFCHSLAMVFLNGYICLELYAATRDLDYNF---GCQPCRVSFDPHEMRLTKAFWWFYI 115
            ||:.|.....|:..:..::|.:   |.....::..|:   |...|.........||...::..|:
pombe    74 PLKQRRLFQLHNFILTIISGAL---LALLVEEVFRNYMRNGLFYCVCDSRHFTQRLVTLYYLNYL 135

  Fly   116 SKILEFADTAFFILRQKWSQLSFLHVYHHSTMFVFCW------ILIKWMPTGSTYVPAMINSFVH 174
            :|.||..||.|..|::|  .|:|||.|||....:.|:      ..::|...|       :|.:||
pombe   136 TKYLELMDTVFLFLKKK--PLAFLHCYHHGITALLCFTQLLGRTSVQWGVIG-------LNLYVH 191

  Fly   175 IIMYGYYALSVLGPRVQRFLWWKRYLTGLQLVQFTIIFFWASQMLVRGCEYGTWITLSMAIYS-L 238
            :|||.||.|:..|.||    |||:::|.:|::||.:      .:::  |.:||:..::...:. |
pombe   192 VIMYSYYFLAACGRRV----WWKQWVTRVQIIQFVL------DLIL--CYFGTYSHIAFRYFPWL 244

  Fly   239 P---------------------FLFMFGKFYMQKY 252
            |                     :||:|..||:..|
pombe   245 PHVGDCSGSLFAAFFGCGVLSSYLFLFIGFYINTY 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 68/262 (26%)
elo2NP_593930.2 ELO 43..286 CDD:460083 68/263 (26%)

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