DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-3

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:274 Identity:74/274 - (27%)
Similarity:116/274 - (42%) Gaps:56/274 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FHPFPDQPDE-RTRNWPLVDSFWTVPVLLS-IYLLMVRYAPKWTTRHKPLQLRAPLFCHS--LAM 68
            |.||....|. |:..|  :.:.|...:..| :|:.::....|...::||.||..|||..:  ||:
 Worm    18 FLPFETSFDAFRSTTW--MQNHWYQSITASVVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAI 80

  Fly    69 VFLNGYICLELYAATRDLDYNFGCQP-------CRVSFDPHEMRLTKAFW--WFYISKILEFADT 124
            ..:.|::.:     |.:..:::..:.       |..|:    .:....||  .|.:||:.|..||
 Worm    81 FSILGFLRM-----TPEFVWSWSAEGNSFKYSICHSSY----AQGVTGFWTEQFAMSKLFELIDT 136

  Fly   125 AFFILRQKWSQLSFLHVYHHSTMFVFCWILIK----------WMPTGSTYVPAMINSFVHIIMYG 179
            .|.:||::  .|.|||.|||.|:.::.|...|          ||..|           ||.:||.
 Worm   137 IFIVLRKR--PLIFLHWYHHVTVMIYTWHAYKDHTASGRWFIWMNYG-----------VHALMYS 188

  Fly   180 YYALSVLGPRVQRFLWWKRYLTGLQLVQFT--IIFFWASQMLVRGCEY--GTW--ITLSMAIYSL 238
            ||||..|..|:.:.:  ...:|.|||.|..  :|.......:....||  .||  :.|...:|..
 Worm   189 YYALRSLKFRLPKQM--AMVVTTLQLAQMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFGVYFT 251

  Fly   239 PFLFMFGKFYMQKY 252
            .|| :|..|:...|
 Worm   252 YFL-LFANFFYHAY 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 68/258 (26%)
elo-3NP_001367447.1 ELO 33..270 CDD:395916 69/259 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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