DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-3

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:274 Identity:74/274 - (27%)
Similarity:116/274 - (42%) Gaps:56/274 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FHPFPDQPDE-RTRNWPLVDSFWTVPVLLS-IYLLMVRYAPKWTTRHKPLQLRAPLFCHS--LAM 68
            |.||....|. |:..|  :.:.|...:..| :|:.::....|...::||.||..|||..:  ||:
 Worm    18 FLPFETSFDAFRSTTW--MQNHWYQSITASVVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAI 80

  Fly    69 VFLNGYICLELYAATRDLDYNFGCQP-------CRVSFDPHEMRLTKAFW--WFYISKILEFADT 124
            ..:.|::.:     |.:..:::..:.       |..|:    .:....||  .|.:||:.|..||
 Worm    81 FSILGFLRM-----TPEFVWSWSAEGNSFKYSICHSSY----AQGVTGFWTEQFAMSKLFELIDT 136

  Fly   125 AFFILRQKWSQLSFLHVYHHSTMFVFCWILIK----------WMPTGSTYVPAMINSFVHIIMYG 179
            .|.:||::  .|.|||.|||.|:.::.|...|          ||..|           ||.:||.
 Worm   137 IFIVLRKR--PLIFLHWYHHVTVMIYTWHAYKDHTASGRWFIWMNYG-----------VHALMYS 188

  Fly   180 YYALSVLGPRVQRFLWWKRYLTGLQLVQFT--IIFFWASQMLVRGCEY--GTW--ITLSMAIYSL 238
            ||||..|..|:.:.:  ...:|.|||.|..  :|.......:....||  .||  :.|...:|..
 Worm   189 YYALRSLKFRLPKQM--AMVVTTLQLAQMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFGVYFT 251

  Fly   239 PFLFMFGKFYMQKY 252
            .|| :|..|:...|
 Worm   252 YFL-LFANFFYHAY 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 68/258 (26%)
elo-3NP_001367447.1 ELO 33..270 CDD:460083 69/259 (27%)

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