DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-4

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_499056.1 Gene:elo-4 / 183367 WormBaseID:WBGene00001242 Length:291 Species:Caenorhabditis elegans


Alignment Length:291 Identity:75/291 - (25%)
Similarity:121/291 - (41%) Gaps:74/291 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SFHPFPDQPDERTRNWP-LVDSFWTVPVLLSI-YLLMVRYAPKWTTRHKPLQLRAPLFCHSLAMV 69
            |:| ||.:.....:.|. |...:|...:.:|: |.::::...|:....||..|:.||...:.|:.
 Worm    30 SYH-FPGEQVADPQYWTILFQKYWYHSITISVLYFILIKVIQKFMENRKPFTLKYPLILWNGALA 93

  Fly    70 FLNGYICL--------ELYAATRDLDYNFGCQPCRVSFDPHEMRLTKAFW--WFYISKILEFADT 124
            ..:....|        .|||........:.|.|..|:          |||  .|.:|||:|..||
 Worm    94 AFSIIATLRFSIDPLRSLYAEGFYKTLCYSCNPTDVA----------AFWSFAFALSKIVELGDT 148

  Fly   125 AFFILRQKWSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPA-----MINSFVHIIMYGYYALS 184
            .|.|||::  .|.|||.|||:.      :||..:.:|:.:..|     ::|.|.|.:||.||.:|
 Worm   149 MFIILRKR--PLIFLHYYHHAA------VLIYTVHSGAEHTAAGRFYILMNYFAHSLMYTYYTVS 205

  Fly   185 VLGPRVQRFLWWKRYLTGLQLVQFTIIFFWASQMLVRGCEYG---TWITLSMAI-YSLP------ 239
            .:|.|:.:   |         |..|:.....:|||.     |   ||:...:.. |.||      
 Worm   206 AMGYRLPK---W---------VSMTVTTVQTTQMLA-----GVGITWMVYKVKTEYKLPCQQSVA 253

  Fly   240 -----------FLFMFGKFYMQKYTVSAVGK 259
                       |..:|.:|:::.|.:.:..|
 Worm   254 NLYLAFVIYVTFAILFIQFFVKAYIIKSSKK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 70/275 (25%)
elo-4NP_499056.1 ELO 48..278 CDD:279492 67/264 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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