DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-2

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_503114.1 Gene:elo-2 / 178532 WormBaseID:WBGene00001240 Length:274 Species:Caenorhabditis elegans


Alignment Length:278 Identity:78/278 - (28%)
Similarity:121/278 - (43%) Gaps:51/278 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DERTRNWPL--VDSFWTVPVLLSI-----YLLMVRYAPKWTTRHKPLQLRAPLFCHSLAMVFLNG 73
            |..|:.|.|  .||:.:..|.||.     ||:.:.:..|.....||..|:..|...:......:|
 Worm    14 DVLTKPWSLDQTDSYMSTFVPLSYKIMIGYLVTIYFGQKLMAHRKPFDLQNTLALWNFGFSLFSG 78

  Fly    74 YICLELYAATRDLDYNFGCQPCRVSFDPHEMRLTKA---FW-W-FYISKILEFADTAFFILRQKW 133
               :..|....:|...|.......|:..:|...|.|   || | |.:||..|..||.|.:||:| 
 Worm    79 ---IAAYKLIPELFGVFMKDGFVASYCQNENYYTDASTGFWGWAFVMSKAPELGDTMFLVLRKK- 139

  Fly   134 SQLSFLHVYHHSTMFVF---------CWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPR 189
             .:.|:|.|||:..||:         .|  .:|        ...:|..||.:||.|:|:..|..:
 Worm   140 -PVIFMHWYHHALTFVYAVVTYSEHQAW--ARW--------SLALNLAVHTVMYFYFAVRALNIQ 193

  Fly   190 VQRFLWWKRYLTGLQLVQFTI-------IFFWASQMLVRGCEYGTWITLSM-AIYSLPFLFMFGK 246
            ..|.:  .:::|.:|:|||.|       :.|..|...|.||.. :|..||: .:..:.:||:|.|
 Worm   194 TPRPV--AKFITTIQIVQFVISCYIFGHLVFIKSADSVPGCAV-SWNVLSIGGLMYISYLFLFAK 255

  Fly   247 F----YMQKYTVSAVGKK 260
            |    |:||.:.:...|:
 Worm   256 FFYKAYIQKRSPTKTSKQ 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 74/269 (28%)
elo-2NP_503114.1 ELO 29..269 CDD:279492 71/257 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2803
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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