DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-1

DIOPT Version :9

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:286 Identity:79/286 - (27%)
Similarity:122/286 - (42%) Gaps:50/286 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LGISFHPFPDQPDERTRNWPLVDSFWTVPVLLSIYLLMVRYAPKWTTRHK-PLQLRAPL--FCHS 65
            :.|:.|...:.||...|.: ..|.| .|.:..||..::|.:..||..|:: |.||..||  :...
 Worm    21 VAIATHGPKNFPDAEGRKF-FADHF-DVTIQASILYMVVVFGTKWFMRNRQPFQLTIPLNIWNFI 83

  Fly    66 LAMVFLNGYICL--ELYA--ATRDLDYNFGCQPCRVSFDPHEMRLTKA-----FWWFYISKILEF 121
            ||...:.|.:.:  |.:.  |.:.:..::    |:| ||     .||.     .|.|..||:.|.
 Worm    84 LAAFSIAGAVKMTPEFFGTIANKGIVASY----CKV-FD-----FTKGENGYWVWLFMASKLFEL 138

  Fly   122 ADTAFFILRQKWSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVL 186
            .||.|.:||::  .|.|||.|||....::.|......|..:.| ...:|..||..||.||.|..:
 Worm   139 VDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSHPLTPGFNRY-GIYLNFVVHAFMYSYYFLRSM 200

  Fly   187 GPRVQRFLWWKRYLTGLQLVQFTIIFFWASQMLVR----------GCEYGTWITLSMAIYSLPFL 241
            ..||..|:  .:.:|.||:|||.|    :..:|..          .|::...:..........:|
 Worm   201 KIRVPGFI--AQAITSLQIVQFII----SCAVLAHLGYLMHFTNANCDFEPSVFKLAVFMDTTYL 259

  Fly   242 FMFGKFYMQKYTV-------SAVGKK 260
            .:|..|::|.|.:       .||.||
 Worm   260 ALFVNFFLQSYVLRGGKDKYKAVPKK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:279492 72/265 (27%)
elo-1NP_501689.1 ELO 39..278 CDD:279492 70/259 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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