DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68alpha and elo-1

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:286 Identity:79/286 - (27%)
Similarity:122/286 - (42%) Gaps:50/286 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LGISFHPFPDQPDERTRNWPLVDSFWTVPVLLSIYLLMVRYAPKWTTRHK-PLQLRAPL--FCHS 65
            :.|:.|...:.||...|.: ..|.| .|.:..||..::|.:..||..|:: |.||..||  :...
 Worm    21 VAIATHGPKNFPDAEGRKF-FADHF-DVTIQASILYMVVVFGTKWFMRNRQPFQLTIPLNIWNFI 83

  Fly    66 LAMVFLNGYICL--ELYA--ATRDLDYNFGCQPCRVSFDPHEMRLTKA-----FWWFYISKILEF 121
            ||...:.|.:.:  |.:.  |.:.:..::    |:| ||     .||.     .|.|..||:.|.
 Worm    84 LAAFSIAGAVKMTPEFFGTIANKGIVASY----CKV-FD-----FTKGENGYWVWLFMASKLFEL 138

  Fly   122 ADTAFFILRQKWSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVL 186
            .||.|.:||::  .|.|||.|||....::.|......|..:.| ...:|..||..||.||.|..:
 Worm   139 VDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSHPLTPGFNRY-GIYLNFVVHAFMYSYYFLRSM 200

  Fly   187 GPRVQRFLWWKRYLTGLQLVQFTIIFFWASQMLVR----------GCEYGTWITLSMAIYSLPFL 241
            ..||..|:  .:.:|.||:|||.|    :..:|..          .|::...:..........:|
 Worm   201 KIRVPGFI--AQAITSLQIVQFII----SCAVLAHLGYLMHFTNANCDFEPSVFKLAVFMDTTYL 259

  Fly   242 FMFGKFYMQKYTV-------SAVGKK 260
            .:|..|::|.|.:       .||.||
 Worm   260 ALFVNFFLQSYVLRGGKDKYKAVPKK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 72/265 (27%)
elo-1NP_501689.1 ELO 39..278 CDD:460083 70/259 (27%)

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