DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68alpha and elo-6

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_500797.1 Gene:elo-6 / 177321 WormBaseID:WBGene00001244 Length:274 Species:Caenorhabditis elegans


Alignment Length:262 Identity:75/262 - (28%)
Similarity:109/262 - (41%) Gaps:60/262 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SFWTVPVLLSIYLLMVRYAPKWT-TRHKPLQLRAPLFCHSLAMVFLNGYICLELYAATRDLDYNF 90
            :||     :|:..::|.:..|.. |..||..|..||...:..         |.:::....|...|
 Worm    33 AFW-----ISMAYVVVIFGLKAVMTNRKPFDLTGPLNLWNAG---------LAIFSTLGSLATTF 83

  Fly    91 GCQPCRVSFDPHEMRLTKAF-------------------WWFYISKILEFADTAFFILRQKWSQL 136
            |..        ||. .::.|                   |.|.:||:.||.||.|.|||:|  .|
 Worm    84 GLL--------HEF-FSRGFFESYIHIGDFYNGLSGMFTWLFVLSKVAEFGDTLFIILRKK--PL 137

  Fly   137 SFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYLT 201
            .|||.|||.....:.::..:.....:|::..| |..||.||||||.|...|.:|.  .|..:.:|
 Worm   138 MFLHWYHHVLTMNYAFMSFEANLGFNTWITWM-NFSVHSIMYGYYMLRSFGVKVP--AWIAKNIT 199

  Fly   202 GLQLVQFTI---IFFWASQMLVRGCEYGT-----WITLSMAIYSLPFLFMFGKFYMQKYTVSAVG 258
            .:|::||.|   |.|....:.|.|....:     |..|.|.|   .::.:||.||.|.| :...|
 Worm   200 TMQILQFVITHFILFHVGYLAVTGQSVDSTPGYYWFCLLMEI---SYVVLFGNFYYQSY-IKGGG 260

  Fly   259 KK 260
            ||
 Worm   261 KK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 73/260 (28%)
elo-6NP_500797.1 ELO 33..262 CDD:460083 73/260 (28%)

Return to query results.
Submit another query.