DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68alpha and sit

DIOPT Version :10

Sequence 1:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_061514427.1 Gene:sit / 1275641 VectorBaseID:AGAMI1_005433 Length:294 Species:Anopheles gambiae


Alignment Length:264 Identity:93/264 - (35%)
Similarity:147/264 - (55%) Gaps:23/264 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FPDQPDERTRNWPLVDSFWTVP--VLLSIYLLMV-RYAPKWTTRHKPLQLRAPLFCHSLAMVFLN 72
            |.:..|.||.:|||:.|  .||  .:::.||..| .:.||:....||.|::..|..::...|.::
Mosquito    17 FTELADPRTNHWPLISS--PVPGLTIIASYLYFVLNFGPKYMANRKPFQMQKTLVVYNFIQVLVS 79

  Fly    73 GYICLELYAATRDLD------YNFGCQPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQ 131
            .|:..|      .||      |::.|||...:.:|..||:.:..:.::::||.|..||.||.||:
Mosquito    80 IYLFAE------GLDGAWLRHYSWRCQPVDFNDNPAAMRVARGCYIYFLAKISELLDTVFFTLRK 138

  Fly   132 KWSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWW 196
            |.:|::|||:|||:.|.:..|...|:.|.|......:|||||||:||.||.::.:||:.|::|||
Mosquito   139 KDNQITFLHLYHHTVMPMISWGATKYYPGGHGTFIGVINSFVHIVMYTYYMMAAMGPQYQKYLWW 203

  Fly   197 KRYLTGLQLVQFTIIFFWASQMLVRGCEYGTW---ITLSMAIYSLPFLFMFGKFYMQKYTVSAVG 258
            |:|:|.||::||.:.|..::|:|...|.|..|   .||..||:   |..:|..||.:.|......
Mosquito   204 KKYITNLQMIQFGMAFAHSAQLLWTDCGYPRWSVFFTLPNAIF---FYMLFNDFYKKSYGSKKAQ 265

  Fly   259 KKPI 262
            ..|:
Mosquito   266 PTPV 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 87/248 (35%)
sitXP_061514427.1 None

Return to query results.
Submit another query.