DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir67c and Ir40a

DIOPT Version :9

Sequence 1:NP_729609.1 Gene:Ir67c / 317838 FlyBaseID:FBgn0052058 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:701 Identity:122/701 - (17%)
Similarity:226/701 - (32%) Gaps:233/701 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QLQLNIYLD--------CNDVELQIGQEVSNLFVNSTADKMKILGRFSSHSLIIACFKDSTRNRT 90
            |.:.|:|||        .|...:...|  :.||.....:.::  |.....|||:     ...|:.
  Fly    64 QKERNVYLDDFLQRLHRSNYKSVVFSQ--TELFFQHIEENLQ--GANECISLIL-----DEPNQL 119

  Fly    91 LNGVKE-----------LLWGLQYLPILFVV---------------DSNMDFYFQQALRHGFIHV 129
            ||.:.:           ..||.::.|...|:               ......|:.||.......:
  Fly   120 LNSLHDRHLGHRLSLFIFYWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIYYNQARPCSDSQL 184

  Fly   130 LALNFMNGSLYTYKPYPKVEVHQIKDMQKFYKLTKLRNLQGQAVRTTVETMTP--------RCFR 186
            ..:|:.:|.....:..|.:..          .|:...|.:|:..|..|....|        ..|.
  Fly   185 QLVNWYDGDNLGLQRIPLLPT----------ALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFE 239

  Fly   187 YRNRHGQL---------VYAGYMYRMVKEFISTYN-------------GTEEHVFGNVDTVPYKE 229
            .......|         |..|..:|::.......|             |:.....|......:..
  Fly   240 EDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTG 304

  Fly   230 GLAALKNGEIDMMPRII-------HALEWYYF-------YRSHILYNIKTYIMVPWAEPLPKSLY 280
            |:..|::|:.|.....:       .|:|:.:|       :.:|.            ...|.::|.
  Fly   305 GIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHA------------PRRLNEALA 357

  Fly   281 FIQPFRGTVW----ITIMVS--FVYASIVIWWIRYRQQGNSSL---------------------- 317
            .::||:..:|    :||:.|  ..|..|.:.:|..|:..||.:                      
  Fly   358 IMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLK 422

  Fly   318 --TQSFMDVLQLLFQLPLSKIW------------HFNMGTHQVVSFIVLFVFG-FMLTNLYTAQL 367
              .::.:...|:..||....||            ..:.|.......||.::.. ::|.::|:|||
  Fly   423 LKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQL 487

  Fly   368 SSYLTTGLFKSQINTFDDLFREKRTLLVESFDAEVLHNMTKEKIIQKEFESIILITSIEEVFK-- 430
            :|.......:..|||            ::...|.::|:..: ..::||..|:.::.:..|:|:  
  Fly   488 TSQFARPAREPPINT------------LQRLQAAMIHDGYR-LYVEKESSSLEMLENGTELFRQL 539

  Fly   431 ----HRKSLNTSYAY-------------EAYEDRIA------------------FELSQQRYLRV 460
                .::.:|....:             |..||:..                  |:|||:.|.|.
  Fly   540 YALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRY 604

  Fly   461 PIFKILKEVYDQRPVFVALRHGLPYVELFNNYLRRIFESGIWIKLQEDSFLE--------GIASG 517
            ..              ||::.|.|::...||.|.::|||||..|:....:.:        .|..|
  Fly   605 SA--------------VAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKG 655

  Fly   518 EISFRKSK---------SREIKIFDKDFYFFAYILLGMGWCVSTIALFLEL 559
            .:..:.|:         |..|...:......|:|.||:|...:.:.|.||:
  Fly   656 SVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir67cNP_729609.1 Lig_chan 288..500 CDD:278489 53/291 (18%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 18/121 (15%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 18/105 (17%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 33/167 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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