DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir67c and Ir7c

DIOPT Version :9

Sequence 1:NP_729609.1 Gene:Ir67c / 317838 FlyBaseID:FBgn0052058 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:452 Identity:88/452 - (19%)
Similarity:159/452 - (35%) Gaps:120/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LGRFSSHSLIIACFKDSTRNRT-----------LNGVKELLWGLQYLPILFVVDSNMDFYFQQA- 121
            |||.|....|....:|.....|           |.|....:|.|..|...|    .::.|..|. 
  Fly    54 LGRSSGTGRIQFLLEDDRVEMTETDTDPPPPSGLTGRPIAIWFLDSLRSYF----RLEMYLNQLG 114

  Fly   122 ---LRHGF-------------------------IHVLALNFM---NGSLYTYKPYPKVEVHQIKD 155
               .|:||                         ::||.:|..   :|:::.|..||....|....
  Fly   115 SPYKRNGFFLVIYTGLEDQPMESLKIMFRRLLNMYVLNVNVFLQRDGTVHLYTYYPYGPHHCQSS 179

  Fly   156 MQKFYK-------------LT------KLRNLQG-QAVRTTVETM-------TPRCFRYRNRHGQ 193
            :..:|.             ||      ||.|:.| :.|..|.|..       .|:....|:.|| 
  Fly   180 LPVYYTAFQDLAAPANGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIEDDPKTPGGRSIHG- 243

  Fly   194 LVYAGYMYRMVKEFIS-TYNGTEEHVFGNVDTVPYKEGLAALK---NGEIDMMPRIIHALEWYYF 254
              ..|.::|.:.|.:: |....|:......:.:|.......||   :||::    :......|..
  Fly   244 --IEGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVN----LTFVCFMYSK 302

  Fly   255 YRSHILYNIKTY------IMVPWAEPLPKSLYFIQPFRGTVWITIMVSFVYASIVIWWIRYRQ-Q 312
            .||.::....:|      ::||....:.......:|||..:|..|:||.::..::|..::... .
  Fly   303 ARSDLMLPSTSYTSFPIVLVVPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALP 367

  Fly   313 GNSSLTQSFMDVLQLLFQLPLSKIWHFNMGTHQVVS--------FIVLFVF-GFMLTNLYTAQLS 368
            |..:|      ||....:||...:|...:|...:.:        .:|:::. ..:|...||.||.
  Fly   368 GLRNL------VLGRRNRLPFMGMWASLLGGLALYNPQRNFARYILVMWLLQTLILRAAYTGQLY 426

  Fly   369 SYLTTGLFKSQINTFDDLFREKRTLLVESFDAEV---LHNMTKEKIIQKEFESIILITSIEE 427
            ..|.....:|.|.:..:       :|.:.::..:   |..:.|:.:....|.:::   |:||
  Fly   427 LLLQDVEMRSPIKSLSE-------VLAKDYEFRILPALRTIFKDSMPTTNFHAVL---SLEE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir67cNP_729609.1 Lig_chan 288..500 CDD:278489 29/153 (19%)
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 12/64 (19%)
Lig_chan 343..593 CDD:278489 29/152 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.