DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Svip and SVIP

DIOPT Version :10

Sequence 1:NP_729471.1 Gene:Svip / 317834 FlyBaseID:FBgn0052039 Length:82 Species:Drosophila melanogaster
Sequence 2:NP_001307269.1 Gene:SVIP / 258010 HGNCID:25238 Length:79 Species:Homo sapiens


Alignment Length:62 Identity:21/62 - (33%)
Similarity:38/62 - (61%) Gaps:4/62 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EERRQQQLDAAEKRRQENEHRGIKNPDSVRRQQQRAEEMQRREEEAARQG-QGQSNLRWQTS 82
            ||:|.:..:|||:|::|...|||.:..||:.::::.|::   |::.|..| ..:..|||..|
Human    21 EEKRAKLAEAAERRQKEAASRGILDVQSVQEKRKKKEKI---EKQIATSGPPPEGGLRWTVS 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvipNP_729471.1 SVIP 1..73 CDD:464888 17/51 (33%)
SVIPNP_001307269.1 SVIP 12..75 CDD:464888 17/56 (30%)

Return to query results.
Submit another query.