DRSC/TRiP Functional Genomics Resources

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Protein Alignment ghi and AT2G30942

DIOPT Version :9

Sequence 1:NP_729495.1 Gene:ghi / 317833 FlyBaseID:FBgn0266124 Length:81 Species:Drosophila melanogaster
Sequence 2:NP_973572.1 Gene:AT2G30942 / 2745572 AraportID:AT2G30942 Length:56 Species:Arabidopsis thaliana


Alignment Length:37 Identity:10/37 - (27%)
Similarity:20/37 - (54%) Gaps:3/37 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FRYLMVTELYMVEKWERITIHVIFMVLFCVFWYFNYS 50
            :.|.:...|||::.|||...:.:.::|   .|:..|:
plant     9 YLYNVTFGLYMLDWWERYLFNSLVLIL---MWFILYN 42

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ghiNP_729495.1 None
AT2G30942NP_973572.1 DUF3317 1..52 CDD:288612 10/37 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1627882at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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