DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and lpp

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_012818600.1 Gene:lpp / 779875 XenbaseID:XB-GENE-951633 Length:614 Species:Xenopus tropicalis


Alignment Length:614 Identity:201/614 - (32%)
Similarity:287/614 - (46%) Gaps:154/614 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PPKPPIKYNEMPQVPSSRQVLCSREPLYSQPLIGVEKTMRGHMPFRKYLSSEFGVADTQINRKT- 115
            ||.||.:.|..| :|:...:  ...|:..:.:..|:....|     |.:.......|.:|:..| 
 Frog    73 PPPPPPEENLQP-MPTLGNL--PPPPVPDEAMFNVQINTGG-----KTIEERRSSLDAEIDSLTS 129

  Fly   116 ------------------------TLDNPAILEQQLEALAYHKLQMEKKGLLGVQAKPTQPLNSF 156
                                    ||.:|:         |...:...|:.::..|...|....|.
 Frog   130 ILADLENSSPYKPRTPQGPGSNTGTLTHPS---------AGTPVTGHKRMIIPNQPPLTATKKSA 185

  Fly   157 TKPLSKTLSKSLIYSNLGSVRKEIETLELLTDETKISASTYSNVNETAMDSSHSSTQKMLSVCTN 221
            |||..::.|:.....:.|:.|.:.......|..|. |..|::...::|..|.|            
 Frog   186 TKPQPQSTSQPAPAGSPGAQRPQPVPAPYATASTP-SRPTFNVQVKSAQPSPH------------ 237

  Fly   222 FI------------SDNE---------------------KDELPPPPSPESAVSSSYSELRHATL 253
            |:            :.|:                     ::.:||||:  ..|...|.       
 Frog   238 FVPPGPQLGQNYSPAPNQYYAPQPTRSPGPMQYAPQPRGQEYIPPPPA--RYVEPGYG------- 293

  Fly   254 EFNKPIDYLQNNQTT------NPLQIYANQYAMQHDATGKSSSTYDSIYEPI---NPRPCVADTL 309
                   |.|.||:.      ..:|.|..:...:...|.:.....:..|.||   ..:|.|... 
 Frog   294 -------YSQGNQSKYQDPYYQSVQGYGGRNGSEVPYTQQGGWKPEPAYSPIPAVGQQPAVGQQ- 350

  Fly   310 PRESY---NLHNSYVND-----------NNPNISHEYNISNSIEANQTLYIHGNARTTFYDVNSI 360
            |..||   |...:|:.|           ..|.::...::....|                    :
 Frog   351 PAGSYQPPNTKKTYITDPPYIPPPPPQPKGPYLAQASSLRPEDE--------------------L 395

  Fly   361 HRNDKEGLKNYISIPTEPVQELENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQG 425
            .|..|:.|.:..:.|:|     |.:|||.:|...|:||.:|||||||::|:.||||..|...|:|
 Frog   396 ERLTKKMLYDMENPPSE-----EYFGRCSRCGENVVGEGTGCTAMDQVFHVECFTCMTCNSKLRG 455

  Fly   426 KPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDA 490
            :||||::.|.:||..|::||||||||.:||:|||||||||.|||.|||||||.:||||:.|||||
 Frog   456 QPFYAVEKKAFCEPCYIRTLEKCSVCAKPIMERILRATGKAYHPHCFTCVVCFRSLDGIPFTVDA 520

  Fly   491 TNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGR 555
            :.|.:||.||||||||||.|||:||||.||||||:|:|||||.||::||:|||||.|| ||.|.:
 Frog   521 SGQIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGSLL-SEGENQ 584

  Fly   556 GCYPLDDHVLCKSCNAKRVQALTNRMTSE 584
            ||||||.|:|||:|||.|:||||.:.:::
 Frog   585 GCYPLDGHILCKACNAARIQALTAKSSTD 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 27/52 (52%)
LIM2_LPP 448..507 CDD:188740 44/58 (76%)
LIM3_LPP 508..575 CDD:188821 48/66 (73%)
lppXP_012818600.1 PHA03247 <4..358 CDD:223021 58/331 (18%)
PRK10263 <171..>341 CDD:236669 34/198 (17%)
LIM1_TRIP6 418..471 CDD:188736 27/52 (52%)
LIM 478..537 CDD:413332 44/58 (76%)
LIM3_TRIP6 538..603 CDD:188820 47/65 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7021
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001663
OrthoInspector 1 1.000 - - oto102427
Panther 1 1.100 - - LDO PTHR24207
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3402
SonicParanoid 1 1.000 - - X2600
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.040

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