DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and Fblim1

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_006539276.1 Gene:Fblim1 / 74202 MGIID:1921452 Length:397 Species:Mus musculus


Alignment Length:482 Identity:137/482 - (28%)
Similarity:204/482 - (42%) Gaps:124/482 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 QLEALAYHKLQMEKKGLLGVQAKPTQPLNSFTKPLSKTLSKSLIYSNLGSVRKEI---------- 180
            :|..|:..:..:.:|.::.            :||..:..|.  ::..|...|:::          
Mouse     6 ELWTLSSSRKSVSQKAIMA------------SKPEKRVASS--VFITLAPPRRDVAVSEEVGQAA 56

  Fly   181 ------ETLELLTDETKISASTYSNVNETAMDSSHSSTQKMLSVCTNFISD----------NEKD 229
                  ...|:|..:|..:|...|....|....:::|    ||..|..:|:          ||:|
Mouse    57 CEARRARPWEMLPTKTPGAAVGRSPKTWTPSGKTNAS----LSGVTPQLSNGGCSLPPPSLNEED 117

  Fly   230 -ELPPPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYANQYAMQHDATGKS-SSTY 292
             :|||||.|.||                    ||...:...|:            ..||| .|..
Mouse   118 LDLPPPPPPPSA--------------------YLPLPEEEPPV------------LPGKSLISDL 150

  Fly   293 DSIYEPINPRPCVADTLPRESYNLHNSYVNDNNPNISHEYNISNSIEANQTLYIHGNARTTFYDV 357
            :.::.| .|.|......|.:..::|        |...|      :|.:.:.|             
Mouse   151 EQLHLP-PPPPPPPPQAPSKGSSVH--------PPPGH------AIPSEEEL------------- 187

  Fly   358 NSIHRNDKEGLKNYISIPTEPVQELE---NYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDC 419
                          ...|.|||...|   :...|..|:..|........||.:.||..||||..|
Mouse   188 --------------PPPPEEPVTLPEREVSTDVCGFCHKPVSPRELAVEAMKRQYHAQCFTCRTC 238

  Fly   420 QINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGL 484
            :..|.|:.||..||:|.||..|..|||||..|.|.:.|.::||.||.:||.|||||.|.:.:...
Mouse   239 RRQLAGQRFYQKDGRPLCEPCYQDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISDE 303

  Fly   485 LFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLS 549
            .|.:|:.||.||:.||::||||.|.:|:.||:|..| ::..::..:.|:||..||:||||.:|||
Mouse   304 SFALDSQNQVYCVADFYRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCSVLLS 367

  Fly   550 SEAEGRGCYPLDDHVLCKSCNAKRVQA 576
            .|...:|||||:||:.||.|:.||..|
Mouse   368 VEPTDQGCYPLNDHLFCKPCHLKRSAA 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 21/52 (40%)
LIM2_LPP 448..507 CDD:188740 27/58 (47%)
LIM3_LPP 508..575 CDD:188821 31/66 (47%)
Fblim1XP_006539276.1 LIM <203..260 CDD:351770 21/56 (38%)
LIM2_FBLP-1 267..319 CDD:188758 22/51 (43%)
LIM3_Zyxin_like 327..388 CDD:188743 28/61 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24207
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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