DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and Fhl2

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_113865.1 Gene:Fhl2 / 63839 RGDID:61963 Length:279 Species:Rattus norvegicus


Alignment Length:190 Identity:56/190 - (29%)
Similarity:85/190 - (44%) Gaps:13/190 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 ENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCE--YDYLQTL 445
            |...:|.:|...::..:.........:|..||||..||..:..|.|...:.:.:|.  |:....|
  Rat    96 EYSSKCQECKKTIMPGTRKMEYKGSSWHETCFTCQRCQQPIGTKSFIPKENQNFCVPCYEKQYAL 160

  Fly   446 EKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQ-NYCITDFHKKFAPRCC 509
            : |..|.:||....:....:|:|.:||.|..|.|.|.|..||  |.:: .||:|.|...:|.:|.
  Rat   161 Q-CVQCKKPITTGGVTYRDQPWHRECFVCTACKKQLSGQRFT--ARDEFPYCLTCFCDLYAKKCA 222

  Fly   510 VCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKSC 569
            .|..||   .|...|..:...:|.:|.:|:.|:.|.|.|    .|||.....|.:||..|
  Rat   223 GCTNPI---SGLGGTKYISFEERQWHNDCFNCKKCSLSL----VGRGFLTERDDILCPDC 275

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 13/54 (24%)
LIM2_LPP 448..507 CDD:188740 21/59 (36%)
LIM3_LPP 508..575 CDD:188821 20/62 (32%)
Fhl2NP_113865.1 LIM <5..33 CDD:413332